Biological Basis for Life

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stanford_eba3_c3.ppt

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Exploring Biological Anthropology:
The Essentials, 3rd Edition

CRAIG STANFORD

JOHN S. ALLEN

SUSAN C. ANTÓN

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As you work through this set of chapter slides, keep in mind the notations that are included from your instructor. Open, read carefully, download if necessary, and use in conjunction with your reading and video lesson study. All these components supplement each other. The wise student will keep this in mind.

Copyright © 2013 Pearson Education, Inc. All rights reserved.

Chapter 3
Genetics: Cells and Molecules

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We’re getting into critical and foundational concepts now that will help clarify so much else in this course. Don’t skimp on your study time! Go for it!

Copyright © 2013 Pearson Education, Inc. All rights reserved.

Genetics

  • The Study of Genetics
  • Cellular and molecular genetics
  • Classical and Mendelian genetics
  • Population genetics
  • Phylogenetics
  • Behavioral genetics

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THE STUDY OF GENETICS:

Modern study & cloning controversy (see Box 3.1)

 

Q. What is the “stuff” of life? “There’s something there, but what is it”

Darwin & Mendel were ”in the dark”

 

* Blood types discovered c. 1900

The term “gene” coined in early 20th century by Johannson

 

HOW GENETICS HAS BEEN APPROACHED BY SOME, EVEN UNWITTINGLY

Example...

* Tentative steps taken by Mendel in mid-19th century! How so?

 

He studied pedigrees & traits of pea plants; what causes a “throw back”? Seven traits: tall/short, violet/blue, etc. Speaks to principles of dominance & recessive.

 

Do the EARLOBES experiment with your friends….How many have “attached” vs. “hanging” earlobes? Why might this variation exist?

 

TERMINOLOGY TO REMEMBER

 

* Cellular genetics: Study of the basic building blocks of life

 

* Population genetics today: Examines genetic variation within & between populations of the same species (e.g., Irish light haired vs. Italian/Irish with darker hair living in Ireland).

 

* Phylogenetics: uses tree-like diagrams to depict relationships between species; uses observable (physical) & molecular/genetic traits.

 

DRAW A SIMPLE “TREE” FROM CHIMP TO HOMINID TO...(see handout listed at course map.

* Behavioral genetics: attempts to gain understanding of human behavior with respect to how it may/may not be influenced by genetics. Example: road rage as an inheritance from our primate ancestors? Fight or flight.

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The Cell

  • The basic building block of life

  • Single celled organisms

  • Multicellular organisms
  • Prokaryotes
  • No compartments for genetic material

  • Eukaryotes
  • Separated genetic material

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All cells contain proteins which are are “long chains of amino acids” (20 in all)

 

* Protozoa & Metazoa: these are single celled bacteria vs. multi-cellular organisms. Another distinction is...Prokaryote vs. Eukaryote

 

* Prokaryotic vs. Eukaryotic cells: these are “simple” cells (no nucleus) vs. nucleated cells

 

* Somatic (regular) vs Gametic or sex cells (sperm & ova)

 

* Stem cells (undifferentiated) vs. mature (differentiated) cells; Dolly, etc. Found in fetus & in nasal tissue.

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Cell Anatomy (Eukaryotic)

  • Nucleus
  • Deoxyribonucleic Acid (DNA)
  • Gametes
  • Cytoplasm
  • Cell Membrane
  • Mitochondria
  • Ribosomes
  • Endoplasmic Reticulum

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Look this up in this chapter.

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DNA Structure I: The Molecular Level

  • DNA Structure I: The Molecular Level
  • Double Helix
  • Nucleotide
  • Sugar
  • Phosphate
  • Base
  • Purines
  • Adenine
  • Guanine
  • Pyrimidines
  • Cytosine
  • Thymine

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At the molecular level, the basic unit of DNA is a long strand of nucleotides composed of sets of base pairs of purines & pyramidines.

 

  • The “purines” are A & G, while the pyramidines are T & C); a nucleotide will vary depending on the base pairs it carries. That is, does the string go...a t c g or does it go a c g t?

* Chromosomes (Karyotype on p.49) & Cell Division: A chromosome is really two long continuous strings/strands of DNA. One string is called a “chromatid”; together, the two strings form a double helix.

 

 

In the chromosomes (a long string of nucleotides), purine A matches up only w/pyramidine T; purine C only w/pyramidine

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DNA Function I: Replication

Separate Strands

Enzymes

Mutations

Proofreading and

Repair

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* DNA Replication: Begins inside the nucleus of the cell when two strands “split” to isolate a string of DNA (a gene) and allow or “invite” the transcription of RNA (bits pull up alongside the single strand of DNA). A template is constructed to enable the building or synthesis of a new DNA strand.

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DNA Function II: Protein Synthesis

  • Proteins
  • Compose bone and muscle
  • Hormones
  • Enzymes
  • Cellular function

  • Protein Synthesis
  • Amino acids
  • Dipeptides
  • Polypeptide chains

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Protein Synthesis

Use this depiction of the process of protein synthesis to get a grasp of this amazing process which, incidentally, is happening in you at this moment.

Yeah, this is how it happens.

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DNA Function II: Protein Synthesis (cont’d)

  • Genetic Code
  • Nucleotides
  • Codons
  • Genes
  • Redundancy

  • Transcription and Translation
  • mRNA
  • tRNA
  • Introns
  • Exons

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* Protein synthesis: When the string of RNA is ready, out it goes into the cytoplasm where it meets a ribosome, which will enable the transcription process (aka protein synthesis) to begin. The tRNA’s carries w/it a particular amino acid. Slowly/precisely, a chain of amino acids is built when the end of the molecule (mRNA) is reached.

 

Mitosis occurs in the somatic cells; diploid (mom & pop’s) Meiosis occurs in gametic/sex cells; haploid (mom or pop’s)

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DNA Structure II: Chromosomes and Cell Division

  • Chromatin State
  • Chromosomes form
  • Centromere
  • Diploid somatic cells
  • Haploid sex cells
  • Mitosis
  • Somatic cell division
  • Meiosis
  • Sex cell division

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While in the nucleus, DNA exists as long, single strands (aka chromatid). During mitosis, the long strands coil up (safer) into what we call “chromosomes” and pair up w/the respective homologous chromosome. [“Homologous” means that the two strings are members of same pair (e.g., contain “same” DNA/the “eye color” gene at roughly the same spot along the strand); 23 pairs = 46 total.

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The double helix structure of DNA is depicted here.

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DNA Structure II: Chromosomes and Cell Division (cont’d)

  • Mitosis
  • Interphase
  • Prophase
  • Metaphase
  • Anaphase
  • Telophase
  • Meiosis
  • Tetrad formation
  • Crossing over
  • Recombination
  • Reduction division
  • Second Meiotic Division

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Read up on this generally. Try to imagine it, but don’t worry if you don’t grasp it fully.

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Chromosomal Abnormalities

  • Nondisjunctive Errors: The failure of homologous chromosomes to separate properly during cell division
  • Monosomy
  • Turner Syndrome
  • Trisomy
  • Down’s Syndrome

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* Chromosomal abnormalities: where mutations are located

 

Achondroplasitic dwarfism...chromosome #4

Down’s Syndrome...trisomy/extra chromsome #21

 

Breast & Ovarian cancer...brca genes 1 & 2

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Molecular Tools for Bioanthropological Research

  • Indirect Methods
  • Immunological Methods
  • DNA Hybridization
  • Direct Methods
  • DNA Sequencing
  • Protein Sequencing

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*Indirect vs Direct Methods of research:

 

Indirect methods include studies in anatomy & physiology (for example, Darwin studied his finches from “outside”).

Direct method exemplified by comparison of aspects of DNA from different species; most especially by HGP

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Molecular Tools for Bioanthropological Research (cont’d)

  • PCR

  • Mitochondrial DNA (mtDNA)

  • Ancient DNA

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PCR (see next slide for this)

 

* Mitochondrial DNA: Found in out in cytoplasm of female’s cell; inherited maternally & clonally (varies minimally over time).

 

* Ancient DNA: That which is recovered from bone specimens from the likes of long deceased Homo sapiens or Homo neandertal remains

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Molecular Tools for Bioanthropological Research (cont’d)

  • Polymerase Chain Reaction
  • The polymerase chain reaction (PCR) is a method for the amplification of minute quantities of DNA
  • PCR makes possible the recovery of ancient DNA from bone or fossil material, up to about 100,000 years old, provided that preservation conditions were adequate

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Think “forensic files” tv and other investigative shows where the recovery of DNA samples assists with detective work!