3 Essays APA Format Two 200 Words and One 500 Words
A Guide to the Natural World
David Krogh
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Chapter 21 • Lecture Outline
Viruses, Bacteria, Archaea, and Protists:
The Diversity of Life 1
Biology
Fifth Edition
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21.1 Life’s Categories and
the Importance of Microbes
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Life’s Categories and the Importance of
Microbes
• All living things on Earth can be classified
as falling into one of three domains of life:
• Bacteria
• Archaea
• Eukarya
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Life’s Categories and the Importance of
Microbes
• All the members of Domains Bacteria and
Archaea are single-celled and microscopic.
• Domain Eukarya is further divided into four
kingdoms:
• plants
• animals
• fungi
• protists
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Amazing Diversity in the Living
World
Figure 21.1
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Importance of Microbes
• Microbes—living things so small they
cannot be seen with the naked eye—are
indispensable to all life on Earth.
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Importance of Microbes
• Microbes produce more than half of Earth’s
atmospheric oxygen.
• The bacteria and archaea among them are
responsible for putting atmospheric nitrogen
into a form plants can use.
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Importance of Microbes
• Bacteria and fungi are the most important
decomposers of the natural world.
• They break down dead organic matter, such
as tree branches, and recycle the resulting
elements back into the Earth.
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Importance of Microbes
• Microbes live in all environments in which
larger life-forms exist.
• They are present in numbers so immense
that the weight or biomass of all microbes
on Earth exceeds the biomass of all larger
life-forms.
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Domain
Bacteria
Domain
Archaea
Kingdom
Protista
Kingdom
Plantae
Kingdom
Animalia
Kingdom
Fungi
Domain Eukarya
gram-
positive
purple
bacteria
methane
producers
salt
lovers
cyano-
bacteria hot acid
lovers diatoms
dinoflagellates
flagellates
foram-
inifera
amoebae
flowering
plants
evergreens
ferns
mosses
vertebrates
inverte-
brates
mushrooms
yeast
Domain Eukarya
(Protists, Plants, Animals, Fungi)
Domain
Archaea
Domain
Bacteria
Universal
ancestor Figure 21.2
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21.2 Viruses: Making a Living
by Hijacking Cells
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Viruses
• Viruses are noncellular replicating entities
that must invade living cells to carry out
their replication.
• Because viruses can carry out so few of
life’s basic processes on their own, most
scientists do not classify them as living
things.
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HIV: The AIDS Virus
• The human immunodeficiency virus (HIV),
which causes AIDS, has two structures
common to all viruses: genetic material and
a protein coat, called a capsid, surrounding
this material.
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HIV: The AIDS Virus
• HIV also has one other structural element
that many viruses possess: a fatty
membrane, called an envelope, which
surrounds the capsid.
• HIV does its damage by invading immune
system cells called helper T-cells, which are
then destroyed.
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(a) Human immunodeficiency
virus (HIV)
reverse transcriptase
protease
integrase
(b) Life cycle of HIV
receptor (spike)
capsid
genetic material
(2 strands RNA)
envelope
1. HIV binds with
receptors on
T-cell.
receptor
for HIV 2. Viral envelope fuses with T-cell membrane.
3. Capsid disintegrates: viral RNA and enzymes are released.
nucleus 4. HIV’s reverse transcriptase synthesizes DNA from viral RNA.
double-stranded
viral DNA
viral RNA
integrase
5. Integrase splices
viral DNA into
cell’s DNA. integrated
viral DNA
protease
viral components
8. New virus particle buds
off from cell and goes
on to infect more cells.
7. Cell membrane becomes
the envelope for new HIV
particle.
6. Viral DNA and protease begin
turning out materials necessary
to produce viral clones.
HIV: The AIDS Virus
Figure 21.3
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Viral Lifecycle
• Most viruses carry out four steps in their life
cycle:
1. They get their genetic material inside a “host”
cell.
2. They turn out viral component parts.
3. They construct new virus particles from these
parts.
4. They move the new particles out of the cell, at
which point the particles go on to infect more
cells.
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Influenza A
• Viruses cause a host of human illnesses.
• Health officials worldwide must constantly
be on alert for the emergence of new
members of a particularly dangerous class
of viruses, the influenza A viruses.
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• The H1N1 virus was one of these viruses,
and infected people around the world in
2009.
Pandemic
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Pandemic
Figure 21.5
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21.3 Bacteria: Masters of Every
Environment
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Bacteria
• Bacteria are microscopic, single-celled
organisms that are prokaryotes.
• Prokaryotes are organisms whose genetic
material is not contained within a nucleus.
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Bacteria
• Other defining features of bacteria are that
they have only a single organelle (the
ribosome) and reproduce asexually through
a simple cell splitting called binary fission.
• Millions of species of bacteria exist.
• Bacteria are metabolically far more diverse
than plants or animals.
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Different Shapes of Bacteria
Figure 21.7
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21.4 Intimate Strangers:
Humans and Bacteria
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Humans and Bacteria
• Bacteria live on and in human beings in
great numbers.
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Humans and Bacteria
• In the digestive tract, the relationship
between humans and many bacteria is one
of mutualism: a relationship between two
organisms that benefits both of them.
• Bacteria get food and habitat from this
relationship; human beings get an
efficiently functioning digestive system.
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scalp
about 200 species of resident bacteria in mouth
nasal passages
few resident bacteria in stomach because of its acidic pH
digestive
tract
500-1,000 species of resident bacteria in large intestine
rectum
vagina
armpit
skin
Humans and Bacteria
Figure 21.8
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21.5 Bacteria and Human Disease
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Bacteria and Human Disease
• Only a small proportion of bacteria are
pathogenic or disease causing, but these
bacteria are responsible for some of
humanity’s worst diseases.
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Bacteria and Human Disease
• A few pathogenic bacteria cause harm by
invading human cells, but bacteria generally
do their damage by releasing or leaving
behind harmful substances called toxins.
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Bacteria and Human Disease
• The primary human defense against
pathogenic bacteria is the class of drugs
known as antibiotics, defined as substances
produced by one microorganism that are
toxic to another.
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Antibiotics
• The first antibiotic, penicillin, was
developed in the 1940s.
• Antibiotics work by exploiting the
differences between bacterial and human
cells, such that they kill bacteria while
leaving human cells unharmed.
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The Threat of Antibiotic
Resistance
• The power of antibiotics is being threatened
by the emergence of antibiotic-resistant
strains of bacteria.
• These bacteria are evolving in greater
numbers because of an overuse of
antibiotics in medicine and agriculture.
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The Threat of Antibiotic
Resistance
• One antibiotic-resistant bacterium,
methicillin-resistant Staphylococcus aureus
(MRSA or “mersa”), is being seen with
increasing frequency in the general public,
in particular among high school and college
athletes.
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21.6 Archaea: From Marginal
Player to Center Stage
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Archaea
• Archaea were once thought to be a form of
bacteria but are now known to constitute
their own domain of life, standing beside
Domains Bacteria and Eukarya.
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Archaea
• Archaea are superficially similar to bacteria
in that they are single-celled prokaryotes
that reproduce through simple cell splitting.
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Archaea
• However, archaea are unique in the living
world at the level of the chemical structure
of their cells.
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Archaea and the Universal
Tree of Life
Figure 21.9
Domain
Bacteria
Domain
Archaea
Domain Eukarya
(Protists, Plants, Animals, Fungi)
Universal
ancestor
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Archaea and Their Habitats
• Archaea exist in large numbers in some
common environments.
• They make up 40 percent of the microbial
life in large portions of the world’s oceans.
• They are seen in large numbers in common
soil, where they join bacteria in carrying out
one phase of the nitrogen-fixing process.
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Extremophiles
• Many species of archaea live in extreme
environments and thus are extremophiles:
organisms that grow optimally in
environments whose conditions would kill
most other organisms.
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Extremophiles
• Three large classes of extremophiles are:
• Thermophiles—organisms that live in
extremely hot environments.
• Halophiles—organisms that live in extremely
salty environments.
• Anaerobes—organisms that can either do
without oxygen or that actually are poisoned
by it.
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21.7 Protists: Pioneers in
Diversifying Life
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Protists
• A protist is a eukaryotic organism that does not
have all the defining features of a plant, an
animal, or a fungus.
• This unsatisfactory definition stems from the
fact that the term protist doesn’t refer to a
single evolutionary grouping.
• Instead, it is used as a label for several different
evolutionary lines of organisms, many of which
are only distantly related.
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Bacteria
Green sulfur bacteria
Cyanobacteria
Methanococcus
Thermoplasma
Archaea
Protista
Red algae
Protists can be as different from each other as animals are from plants
Plants Fungi
Nucleariid amoeba
Choanoflagellates
Animals
Eukarya
Figure 21.10
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Protists
• Protists are mostly microscopic.
• All of them live in environments that are at
least moist, if not aquatic.
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Protists
• About 100,000 species are known to exist.
• The small portion of these that are
pathogenic include Plasmodium falciparum,
the cause of malaria, and the intestinal
parasite Giardia, which contaminates water.
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21.8 Protists and Sexual
Reproduction
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Protists and Sexual Reproduction
• For nearly the first 2 billion years after life
appeared, it consisted solely of bacteria and
archaea.
• Protists were the first life-form to evolve
other than bacteria or archaea.
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Protists and Sexual Reproduction
• Protists were the organisms that made
transitions to many of the capabilities and
forms seen in larger organisms today.
• Among these transitions was the change to
sexual reproduction, which protists were the
first to practice.
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Protists and Sexual Reproduction + mating type
(haploid) pairing
– mating type
(haploid)
zygote
(diploid)
cell
fusion
Sexual reproduction
begins with the
fusion of two cells
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21.9 Photosynthesizing Protists
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Photosynthesizing Protists: Algae
• Protists that get their nutrition by
performing photosynthesis are known as
algae.
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Photosynthesizing Protists: Algae
• Some algal species provide examples of
colonial multicellularity, defined as a form
of life in which individual cells form stable
associations with one another but do not
take on specialized roles.
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Photosynthesizing Protists: Algae
• Other algal protists provide examples of
true multicellularity: a form of life in which
individual cells exist in stable groups, with
different cells specializing in different
functions.
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Photosynthesizing Protists: Algae
Figure 21.12
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Photosynthesizing Protists: Algae
• Microscopic algae are important members
of the group of organisms known as
phytoplankton: small photosynthesizing
organisms that float near the surface of
water.
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Photosynthesizing Protists: Algae
• Phytoplankton are very important to life in
general because they produce most of
Earth’s oxygen, and because they form the
base of so many aquatic food chains.
• All phytoplankton are either algae or
bacteria.
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21.10 Heterotrophic Protists
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Heterotrophic Protists
• Heterotrophic protists do not get their
nutrients by performing photosynthesis but
instead get them from consuming either
other organisms or bits of organic matter.
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Heterotrophic Protists
• Some heterotropic protists have evolved
tiny slender extensions, cilia and flagella,
with which they move toward prey or away
from danger.
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Heterotrophic Protists
Figure 21.13
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Heterotrophic Protists
• The protists called amoeba move through
use of pseudopods or “false feet”—slender
extensions of the amoeba into which the rest
of the body flows.
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Heterotrophic Protists
Figure 21.14
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Heterotrophic Protists
• Likewise, the protists called plasmodial
slime molds and cellular slime molds move
by means of this “cytoplasmic streaming.”
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Heterotrophic Protists
• The cellular slime mold called
Dictyostelium discoideum exists as a
collection of individual amoeboid cells that
come together to form a tiny “slug” during
times of little food.
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Heterotrophic Protists
Figure 21.15