Need help assisting with my Microbiology paper on staphylococcus aureus

profiledivadoll40
Staphylococcusaureusonthebodyandhumandisease.pptx

Staphylococcus aureus on the body and human disease

Discovery of a microscopic pathogen

In 1880 a Scottish surgeon, Alexander Ogston, hypothesized that a microscopic germ was responsible for wound infections

He took a sample of pus from a patient, stained it, and under the microscope found Staphylococcus bacteria in enormous numbers

“My delight may be conceived when there were revealed to me beautiful tangles, tufts and chains of round organisms in great numbers, which stood out clear and distinct among the pus cells and debris...”

Cheek cell

Bacterial cells

Bacterial cells

White Blood Cell

Staphylococcus aureus

Staphylococcus aureus (Staph) is a Gram-positive cocci that calls our body home

An estimated 33% of the human population are colonized by S. aureus

It can be found living in the nostrils, ears, tonsils, and also on the skin such as the armpits, groin, and between the butt cheeks

What do these sites have in common?

While carrying S. aureus on the body can be harmless, it has become a leading cause of skin, respiratory, and bloodstream infections

The main cause of Staph infections

Highly contagious!

Gram + bacteria stain purple after a successful gram stain

Staphylococcus on the body and human disease

Staphylococcus bacteria have evolved to live in and on the bodies of animals, including the dry, salty conditions of the skin

For example, an estimated 100% of the population have Staphylococcus epidermidis living in their nose and on their skin

It is a close relative of S. aureus; however, it has a limited ability to cause disease

Fewer people carry S. aureus on their bodies, but it has many virulence factors that makes it a highly successful pathogen

Virulence factors are molecules produced by microbes that results in damage to your body

S. aureus uses its virulence factors to make you its food source!

Staphylococcus aureus virulence factors

S. aureus virulence factors include:

Coagulase enzyme clots our blood. Clotted blood hides the bacteria from our immune system

You can think of the blood clot as a protective net around the bacteria

A biofilm for large-scale attachment of cells to tissue and hiding from our immune system

A sticky netting that protects the cells

Hemolysin enzyme to destroy our red blood cells

Why would S. aureus want to destroy our RBCs?

Leukocidin enzyme to destroy our white blood cells

The yellow strands are the clot

Known skin, sinus, and mouth diseases caused by or associated with Staphylococcus aureus

Skin disease:

Folliculitis (pimples)

Swollen lymph nodes

Psoriasis

Eczema/Rosacea/ Impetigo

Ear infections

Sinus and mouth disease:

Allergies and congestion

Postnasal drip

Sore throat

Cavities and gingivitis

S. aureus location on the body is associated with nearby pimples and rashes

In my experience, people who have pimples or a skin rash around the nose or above the mouth are more likely to harbor S. aureus in their nostrils

If the pimples are below the lips or on drool lines, the bacteria may have come from the mouth/tonsils

Those who carry the bacteria in their ears are more likely to see pimples on their cheek bones, jaw line, and shoulders

Thigh and butt acne may indicate colonization of S. aureus in those areas

Back acne or forehead acne may be a result of S. aureus draining from the scalp while showering/sweating

Nasal S. aureus?

Mouth/tonsil S. aureus?

Ear S. aureus?

S. aureus has also been shown to cause or be associated with more severe, chronic diseases:

Type II diabetes

Lupus

Weight gain/Obesity

Hair loss

Heart disease

Arthritis

Gastrointestinal disease:

Crohn’s

Inflammatory Bowel Disease

Acid reflux

Staphylococcus aureus and chronic disease

You can find a full list of diseases caused by or associated with S. aureus at:

https://www.reddit.com/r/Staphacne/

Hair loss due to infection

If hair loss/thinning is being caused by S. aureus, the location of the hair damage may indicate the location of the active infection

Dogs, cats and other animals can carry S. aureus on their bodies as well!

It may be responsible for various skin and sinus diseases our pets get

A friend had 3 sugar gliders, and in 2017 they all became prone to diarrhea

A heavy concentration of Staph was found in the fecal matter of all 3 sugar gliders!

Staph can travel from the head to the intestines through nasal/throat secretions and has even been shown to colonize human intestines!

Other animals can carry Staphylococcus aureus

The yellow color on the plate indicates heavy S. aureus growth

S. aureus is a major pathogen among the immunocompromised

For immunocompromised persons, Staph can cause rapidly fatal disease

Life-threatening infections it causes includes:

Pneumonia is a major killer

Bacteremia when Staph grows and spreads in the bloodstream

Carditis is inflammation of the heart tissue

Osteomyelitis, an ancient infection, is a disease of the bone

What is made in the bone that makes this disease so deadly?

What makes each disease so deadly? If you are a carrier of S. aureus, why are you not getting these deadly infections?

Antibiotic-resistance in Staphylococcus aureus

Many antibiotics prescribed to treat Staph infections targets the cell wall, specifically Penicillin Binding Protein (PBP)

PBP links the layers of peptidoglycan together. By blocking PBP, a cell wall isn’t formed, and the bacteria dies

Some S. aureus have developed a resistance to antibiotics that target PBP

Disease-causing Staphylococcus aureus can be broken down into two categories:

Methicillin-sensitive S. aureus (MSSA) which is hurt by many cell wall antibiotics (amoxicillin, methicillin, etc.)

MSSA is “regular” Staph and the most common cause of Staph infections

Methicillin-resistant S. aureus (MRSA) is a type of Staph that is resistant to many antibiotics that target PBP

MRSA is a much less common cause of Staph infections

The antibiotic resistance is due to the mecA gene, which codes for a unique PBP (PBP2) that can’t be targeted by some of the antibiotics that kill MSSA

PBP

PBP2

MRSA and MSSA pathogenicity

1% of the overall US population are MRSA carriers

Healthcare workers are at greater risk of carrying MRSA

5% of healthcare workers are estimated to be carriers

MRSA is not more deadly than MSSA, but it is more challenging to treat

Antibiotics exist that fight MRSA infections! For example: antibiotics that stop bacteria from building proteins (Doxycycline/Azithromycin)

MSSA is responsible for more infections and deaths per year than MRSA!

Why does MSSA kill more people per year than MRSA if both are equally deadly?

Trends in Staphylococcus aureus Infections in Veterans Affairs Medical Centers — United States, 2005–2017

Treatment for Staph infections in a hospital

At hospitals, Vancomycin is the antibiotic of choice to treat severe Staph infections

Vancomycin stops cell wall building, but it doesn’t specifically target PBP

Neither MSSA nor MRSA have developed a complete resistance to Vancomycin

The nasal Staph that caused my cystic acne was killed by Vancomycin (VA 30)

How will you detect for the presence of Staphylococcus aureus?

The mannitol salt agar (MSA) test that is commonly used for detecting and differentiating the growth of Staphylococcus bacteria

Staphylococcus epidermidis is a common skin microbe and is not associated with causing disease

Staphylococcus aureus can also be found on the body and is a major human pathogen

Sodium chloride is used to detect Staphylococcus bacteria. There is a high concentration of salt in the MSA test that kills most bacteria

Staphylococcus grow well because they have evolved to handle the salty environment of the human skin

Mannitol is used to differentiate the Staphylococcus that grow. It is a sugar that only some species can use for energy production

S. aureus can eat mannitol for energy, releasing acid

S. epidermidis is unable to eat mannitol, and the pH of the plate stays neutral

Phenol red is the pH indicator in the media

Phenol red is red at a neutral pH and yellow at an acidic pH

The bacteria will be grown at body temperature (98.6 F) for 48 hours

Staphylococcus aureus carriage test

You are going to test your nostrils, ears, and tonsils for the presence of Staphylococcus aureus

Day two:

Look for yellow colonies or a yellow environment to indicate carriage of Staphylococcus aureus

White colonies without the yellow color change are Staphylococcus epidermidis

Day one:

Each student needs 3 sterile cotton swabs, 1 large Mannitol Salt Agar plate, 1 small MSA plate, and two small strips of parafilm (6 squares of it total)

Divide your large plate in half and label one half for your ears and the other half for your nostrils

Write your name on the plate so you can easily find it next class period

Rub 1 cotton swab in and around both ears, then thoroughly rub that on the entire one half the plate

Rub the other swab inside both of your nostrils and repeat on the other half of the plate

Cover the rim of your plate with parafilm to prevent the media from drying out

We will incubate the plates at 37 Celsius for 48 hours

Testing for tonsil carriage of S. aureus

You will bring the mini MSA plate, cotton swab and a small strip of parafilm home (or to the school bathroom) to test your tonsils for S. aureus presence

Bring the inoculated plate to the next class and we’ll grow the bacteria at body temperature

We’re going to collect Kahoot data on tonsil, ears, and nostrils carriage and include it in our Staph research papers

Instructions for the tonsil swab:

Label the base of your small plate with the environment tested and your first name (write small!)

Use a mirror and bright light (phone) to find your tonsils. Use the swab to rub and press against one tonsil, then rub and press the same swab on your second tonsil. You’ll then rub the swab over the entire mini MSA plate

Try not to contaminate the plate and swab and be mindful of the gag reflex!

If you don’t have tonsils, swab the area where your tonsils were!

Wrap the plate with parafilm, put it in your bookbag, then bring it to our next class

If you don’t have parafilm, seal it in a sandwich bag/aluminum foil

Elimination of Staphylococcus aureus from my nostrils

In early 2014, I started frequently getting nose sores inside my nostrils (so painful).

Knowing that I was a nasal carrier of S. aureus, I found a publication from Northwestern University that suggested Triple Antibiotic Ointment (Neosporin) was an effective way to kill nasal S. aureus

I applied the ointment 2x a day for 20 days into my nostrils with a cotton swab

I tracked my progress with mannitol salt agar plates

After 20 days of treatment, I completely decolonized my nostrils of Staph

I haven’t gotten a nose pimple since!

Elimination of that bacteria also, unexpectedly, got rid of my pimples

I had been getting regular acne since I hit puberty

My nasal decolonization experiment

Plate 1: 5 days of nasal Neosporin treatment

Plate 2: 10 days of nasal Neosporin treatment

Plate 3: 20 days of nasal Neosporin treatment

Family members can be carriers of Staphylococcus aureus

Father

Mother

Sister

My sister and I were sterile when we left the womb. How do you think we both became carriers of Staph?

Colonized by Staph again in May 2015

I was Staph-free (and pimple-free) from August 2014 through May 2015

I had stopped applying Triple Antibiotic Ointment to my nostrils because I consistently tested negative

In May of 2015, my face started to get oily, my nose became chronically itchy and congested, and I starting breaking out with cystic acne

I found I was again colonized by S. aureus in my nostrils, and it was now living in my ears!

S. aureus from ears

Trial and error to kill the 2015 Staph

It took almost a year of trial and error to effectively control this new Staphylococcus aureus that was living in my nostrils and ears

Some strains (versions) of S. aureus are stronger than others. Neosporin was not able to fully kill this new Staph

2016: Cleaning my nostrils and ears with rubbing alcohol

I learned that regularly cleaning my nostrils and ears with cotton swabs soaked with 70-90% isopropyl alcohol was able to effectively manage the presence of Staphylococcus aureus

I became colonized again (!) in Fall 2017

While performing this experiment with students during Fall 2017, I discovered I was colonized again by S. aureus in my nostrils

I’m pretty careful with touching my nose, and I’m not sure how I acquired the bacteria

October 9th 2017 I was not colonized by S. aureus in my nostrils (right) nor ears (left)

On October 13th I had S. aureus living in my nostrils

My Staphylococcus aureus under the microscope

1000x magnified Gram stain of my nasal Staph aureus (purple cocci). Anyone speculate what the pink material is that is surrounding the bacteria?

Using chlorhexidine to kill nasal Staph

Alcohol evaporates quickly, and I don’t believe it lasted long enough in my nose to effectively kill S. aureus

I tried a new method to kill my nasal Staph: chlorhexidine (Hibiclens)

For two days, I cleaned my nostrils with a cotton swab wet with chlorhexidine

After those two days, I had fully killed the S. aureus in my nostrils (right)

Killing my mom’s nasal Staph with chlorhexidine

After learning how effective chlorhexidine was, I asked my mom to perform an experiment

She had previously tested positive for nasal Staph, but she hadn’t treated it with anything

The left side of the plate was before she disinfected her nostrils with chlorhexidine

A lot of S. aureus grew

The right side of the plate are her nostrils 5 minutes after applying chlorhexidine

In 5 minutes, my mom was able to fully get rid of her nasal Staph!

My current routine

I now regularly clean my nostrils, ears, and body with chlorhexidine

I have not tested positive in my nostrils/ears since October 2017

The following link has the decolonization method that I follow: https://www.reddit.com/r/Staphacne/comments/428wtm/healthyalmonds_ears_and_nose_method/

Staphylococcus aureus decolonization methods

Removal of S. aureus from the body has been shown to be an effective way to prevent Staph infections

Established nasal decolonization methods include:

Mupirocin (Bactroban)- antibiotic that stops the bacterial ribosome from building proteins

Povidone-iodine nasal swabs- it’s a halogen

How do halogens kill?

Nozin- uses alcohol to kill nasal S. aureus

Alcohol breaks apart the plasma membrane of bacteria

Recommended skin decolonization methods include:

Bleach baths contains chlorine, a potent free radical generator

Chlorhexidine body wash (Hibiclens)

How does this antiseptic kill?

Why I regularly clean my body with chlorhexidine

In January 2018, I discovered I was colonized by S. aureus in two areas I never suspected; my belly button and my scalp

I was able to immediately kill my navel Staph with chlorhexidine

Using Hibiclens as a shampoo, with time, I was able to effectively kill my scalp Staph

My latest challenge: killing my tonsil Staph

At the end of 2018, I learned my tonsils were persistently colonized by Staphylococcus aureus

Makes sense since it’s warm, moist, and nutrient-rich

Nutrient-rich because the food/drink all hits my tonsils before reaching my stomach

My tonsils looked fine, and were not swollen or inflamed

Tonsil colonization by S. aureus has been shown associated with frequent sore throats as well as skin and body-wide diseases!

How often do we clean our tonsils?

Latest challenge: killing my tonsil Staph

Tonsils plays a role in providing mouth and throat immunity

If colonized by Staph, your immune system is likely keeping the bacteria from causing serious disease

However, bacteria can flourish in little crevices (crypts) in the tonsil, resulting in disease

Tonsil stones may develop in a crevice, and it can contain millions of bacterial cells!

Tonsil stones are a known cause of halitosis (bad breath)

Latest challenge: killing my tonsil Staph

I tried multiple antiseptics to rid my tonsils of S. aureus

Things I tried that didn’t work

Swishing mouthwashes (with different active ingredients, including chlorhexidine) around the back of my throat

Hydrogen peroxide as a throat wash

Ridding the tonsils of S. aureus

After swishing mouthwashes failed to rid my tonsil Staph, I continued using mouthwash but also focused on pushing out every possible tonsil stone from my tonsils

Some stones only appeared after I pressed on my tonsils with a cotton swab

Eventually, I started pressing cotton swabs soaked with mouthwash against my tonsils

I wanted the liquid to help push out tonsil stones that were deeper in my tonsil crypts

This released even more stones!

Ridding the tonsils of S. aureus

One day, while cleaning my tonsils, I pulled back my left anterior pillar to see if there were any stones hiding behind it

There was a hidden tonsil pocket containing a big tonsil stone

S. aureus can be removed from the tonsils (2019)

After removing the mother lode of tonsil stones in early June 2019, I had tested my tonsils multiple times for the presence of S. aureus

That stone was the main home of my tonsil Staph, and by removing it I had temporarily decolonized my tonsils of that bacteria! ( the bacteria unfortunately came back )

I now regularly swish mouthwash towards the back of my throat and semi-regularly soak a cotton swab in mouthwash and clean my tonsils with it

I use one swab per tonsil

Xylitol, a common sweetener in chewing gum, and chili powder, has been shown to hurt Staphylococcus aureus

Antiseptics that kill my tonsil Staph

While I still harbor the bacteria on my tonsils, I’ve learned of multiple antiseptics that can keep the bacteria at bay

There is no growth when the S. aureus is exposed to the following antiseptics:

1. H202. Hydrogen peroxide

2. Chlorhex. Chlorhexidine

3. Cetyl P MW. Cetylpyridinium chloride mouthwash

4. FL MW. Fluoride mouthwash

S. aureus carriage data from students between Spring 2017 and Spring 2020

Spring 2017 through Spring 2020 students Yes No Percentage of students that answered yes
Colonized by S. aureus 411 143 74%
Colonized by S. aureus in the nostrils 233 286 45%
Colonized by S. aureus in the ears 332 207 62%
Colonized by S. aureus in the tonsils/throat 88 25 78%

At-home, student testing for Staphylococcus aureus

image1.jpeg

image2.jpeg

image3.png

image4.jpeg

image5.jpeg

image6.png

image7.jpeg

image8.jpeg

image9.png

image10.jpeg

image11.jpeg

image12.png

image13.jpeg

image14.jpeg

image15.gif

image16.jpeg

image22.jpeg

image23.jpeg

image17.jpeg

image18.jpeg

image19.jpeg

image20.jpeg

image21.jpeg

image24.jpeg

image25.jpeg

image26.jpeg

image27.jpeg

image28.png

image29.jpeg

image30.jpeg

image31.jpeg

image32.jpeg

image33.png

image34.jpeg

image35.jpeg

image36.gif

image37.gif

image38.jpeg

image39.png

image40.jpeg

image41.png

image42.gif

image43.jpeg

image44.gif

image45.png

image46.jpeg

image47.jpeg

image48.png

image49.jpeg

image50.png

image51.jpeg

image52.png

media1.mp4

image53.png

image54.png

image55.png

image56.jpeg

image57.png

image58.png

image59.jpeg

image60.png

image61.png

image62.jpeg

image63.jpeg

image64.png

image65.jpeg

image66.jpeg

image67.jpeg

image68.jpeg

image69.jpeg

image70.jpeg

image71.png

image72.jpeg

image76.png

image73.jpeg

image74.jpeg

image75.png

image77.jpeg

image78.jpeg

image79.jpeg

image80.png

image81.png

image82.jpeg

image83.jpg

image84.png

image85.jpeg

image86.jpeg

image87.jpeg

image88.png

image89.jpeg

image90.jpeg

image91.jpeg

image92.png

image93.png

image94.png

image95.jpeg

image96.png

image97.png

image98.png

image99.jpg

image100.jpg