| AanI | TTA'TAA |
| AarI | CACCTGCNNNN'NNNN |
| AasI | GACNNNN'NNGTC |
| AatI | AGG'CCT |
| AatII | GACGT'C |
| AbsI | CC'TCGAGG |
| AccI | GT'MKAC |
| AccII | CG'CG |
| AccIII | T'CCGGA |
| Acc16I | TGC'GCA |
| Acc36I | ACCTGCNNNN'NNNN |
| Acc65I | G'GTACC |
| AccB1I | G'GYRCC |
| AccB7I | CCANNNN'NTGG |
| AccBSI | CCG'CTC |
| AceIII | CAGCTCNNNNNNN'NNNN |
| AciI | C'CGC |
| AclI | AA'CGTT |
| AclWI | GGATCNNNN'N |
| AcoI | Y'GGCCR |
| AcsI | R'AATTY |
| AcuI | CTGAAGNNNNNNNNNNNNNNNN' |
| AcvI | CAC'GTG |
| AcyI | GR'CGYC |
| AdeI | CACNNN'GTG |
| AfaI | GT'AC |
| AfeI | AGC'GCT |
| AfiI | CCNNNNN'NNGG |
| AflII | C'TTAAG |
| AflIII | A'CRYGT |
| AgeI | A'CCGGT |
| AgsI | TTS'AA |
| AhdI | GACNNN'NNGTC |
| AhlI | A'CTAGT |
| AjiI | CAC'GTC |
| AjnI | 'CCWGG |
| AjuI | GAANNNNNNNTTGGNNNNNNNNNNN' |
| AleI | CCAANNNNNNNTTCNNNNNNNNNNNN' |
| AlfI | CACNN'NNGTG |
| AloI | GCANNNNNNTGCNNNNNNNNNNNN' |
| AluI | GAACNNNNNNTCCNNNNNNNNNNNN' |
| AluBI | GGANNNNNNGTTCNNNNNNNNNNNN' |
| AlwI | AG'CT |
| Alw21I | AG'CT |
| Alw26I | GGATCNNNN'N |
| Alw44I | GWGCW'C |
| AlwFI | GTCTCN'NNNN |
| AlwNI | G'TGCAC |
| Ama87I | GAAAYNNNNNRTG |
| Aor13HI | CAGNNN'CTG |
| Aor51HI | C'YCGRG |
| AoxI | T'CCGGA |
| ApaI | AGC'GCT |
| ApaBI | 'GGCC |
| ApaLI | GGGCC'C |
| ApeKI | GCANNNNN'TGC |
| ApoI | G'TGCAC |
| ApyPI | G'CWGC |
| AquII | R'AATTY |
| AquIII | ATCGACNNNNNNNNNNNNNNNNNNNN' |
| AquIV | GCCGNACNNNNNNNNNNNNNNNNNNNN' |
| ArsI | GAGGAGNNNNNNNNNNNNNNNNNNNN' |
| AscI | GRGGAAGNNNNNNNNNNNNNNNNNNN' |
| AseI | GACNNNNNNTTYGNNNNNNNNNNN' |
| Asi256I | CRAANNNNNNGTCNNNNNNNNNNNNN' |
| AsiGI | GG'CGCGCC |
| AsiSI | AT'TAAT |
| AspI | G'ATC |
| Asp700I | A'CCGGT |
| Asp718I | GCGAT'CGC |
| AspA2I | GACN'NNGTC |
| AspCNI | GAANN'NNTTC |
| AspEI | G'GTACC |
| AspLEI | C'CTAGG |
| AspS9I | GCCGC |
| AssI | GACNNN'NNGTC |
| AsuII | GCG'C |
| AsuC2I | G'GNCC |
| AsuHPI | AGT'ACT |
| AsuNHI | TT'CGAA |
| AvaI | CC'SGG |
| AvaII | GGTGANNNNNNNN' |
| AvaIII | G'CTAGC |
| AviII | C'YCGRG |
| AvrII | G'GWCC |
| AxyI | ATGCAT |
| BaeI | TGC'GCA |
| BaeGI | C'CTAGG |
| BalI | CC'TNAGG |
| BamHI | ACNNNNGTAYCNNNNNNNNNNNN' |
| BanI | GRTACNNNNGTNNNNNNNNNNNNNNN' |
| BanII | GKGCM'C |
| BanIII | TGG'CCA |
| BarI | G'GATCC |
| BasI | G'GYRCC |
| BauI | GRGCY'C |
| BbeI | AT'CGAT |
| Bbr7I | GAAGNNNNNNTACNNNNNNNNNNNN' |
| BbrPI | GTANNNNNNCTTCNNNNNNNNNNNN' |
| BbsI | CCANNNN'NTGG |
| BbuI | C'ACGAG |
| BbvI | GGCGC'C |
| Bbv12I | GAAGACNNNNNNN'NNNN |
| BbvCI | CAC'GTG |
| BccI | GAAGACNN'NNNN |
| BceAI | GCATG'C |
| BcefI | GCAGCNNNNNNNN'NNNN |
| BcgI | GWGCW'C |
| BciVI | CC'TCAGC |
| BclI | CCATCNNNN'N |
| BcnI | ACGGCNNNNNNNNNNNN'NN |
| BcuI | ACGGCNNNNNNNNNNNN'N |
| BdaI | CGANNNNNNTGCNNNNNNNNNNNN' |
| BfaI | GCANNNNNNTCGNNNNNNNNNNNN' |
| BfiI | GTATCCNNNNNN' |
| BfmI | T'GATCA |
| BfoI | CC'SGG |
| BfrI | A'CTAGT |
| BfuI | TGANNNNNNTCANNNNNNNNNNNN' |
| BfuAI | C'TAG |
| BfuCI | ACTGGGNNNNN' |
| BglI | C'TRYAG |
| BglII | RGCGC'Y |
| BisI | C'TTAAG |
| BlnI | GTATCCNNNNNN' |
| BlpI | ACCTGCNNNN'NNNN |
| BlsI | 'GATC |
| BmcAI | GCCNNNN'NGGC |
| Bme18I | A'GATCT |
| Bme1390I | GC'NGC |
| BmeRI | C'CTAGG |
| BmeT110I | GC'TNAGC |
| BmgI | GCN'GC |
| BmgBI | AGT'ACT |
| BmgT120I | G'GWCC |
| BmiI | CC'NGG |
| BmrI | GACNNN'NNGTC |
| BmrFI | C'YCGRG |
| BmsI | GKGCCC |
| BmtI | CAC'GTC |
| BmuI | GG'NCC |
| BoxI | GGN'NCC |
| BpiI | ACTGGGNNNNN' |
| BplI | CC'NGG |
| BpmI | GCATCNNNNN'NNNN |
| Bpu10I | GCTAG'C |
| Bpu14I | ACTGGGNNNNN' |
| Bpu1102I | GACNN'NNGTC |
| BpuAI | GAAGACNN'NNNN |
| BpuEI | GAGNNNNNCTCNNNNNNNNNNNNN' |
| BpuMI | CTGGAGNNNNNNNNNNNNNNNN' |
| BpvUI | CC'TNAGC |
| BsaI | TT'CGAA |
| Bsa29I | GC'TNAGC |
| BsaAI | GAAGACNN'NNNN |
| BsaBI | CTTGAGNNNNNNNNNNNNNNNN' |
| BsaHI | CC'SGG |
| BsaJI | CGAT'CG |
| BsaMI | GGTCTCN'NNNN |
| BsaWI | AT'CGAT |
| BsaXI | YAC'GTR |
| BsbI | GATNN'NNATC |
| Bsc4I | GR'CGYC |
| BscAI | C'CNNGG |
| BscGI | GAATGCN' |
| Bse1I | W'CCGGW |
| Bse8I | ACNNNNNCTCCNNNNNNNNNN' |
| Bse21I | GGAGNNNNNGTNNNNNNNNNNNN' |
| Bse118I | CAACACNNNNNNNNNNNNNNNNNNNNN' |
| BseAI | CCNNNNN'NNGG |
| BseBI | GCATCNNNN'NN |
| BseCI | CCCGT |
| BseDI | ACTGGN' |
| Bse3DI | GATNN'NNATC |
| BseGI | CC'TNAGG |
| BseJI | R'CCGGY |
| BseLI | T'CCGGA |
| BseMI | CC'WGG |
| BseMII | AT'CGAT |
| BseNI | C'CNNGG |
| BsePI | GCAATGNN' |
| BseRI | GGATGNN' |
| BseSI | GATNN'NNATC |
| BseXI | CCNNNNN'NNGG |
| BseX3I | GCAATGNN' |
| BseYI | CTCAGNNNNNNNNNN' |
| BsgI | ACTGGN' |
| Bsh1236I | G'CGCGC |
| Bsh1285I | GAGGAGNNNNNNNNNN' |
| BshFI | GKGCM'C |
| BshNI | GCAGCNNNNNNNN'NNNN |
| BshTI | C'GGCCG |
| BshVI | C'CCAGC |
| BsiEI | GTGCAGNNNNNNNNNNNNNNNN' |
| BsiHKAI | CG'CG |
| BsiHKCI | CGRY'CG |
| BsiSI | GG'CC |
| BsiWI | G'GYRCC |
| BslI | A'CCGGT |
| BslFI | AT'CGAT |
| BsmI | CGRY'CG |
| BsmAI | GWGCW'C |
| BsmBI | C'YCGRG |
| BsmFI | C'CGG |
| BsnI | C'GTACG |
| Bso31I | CCNNNNN'NNGG |
| BsoBI | GGGACNNNNNNNNNN'NNNN |
| Bsp13I | GAATGCN' |
| Bsp19I | GTCTCN'NNNN |
| Bsp24I | CGTCTCN'NNNN |
| Bsp68I | GGGACNNNNNNNNNN'NNNN |
| Bsp119I | GG'CC |
| Bsp120I | GGTCTCN'NNNN |
| Bsp143I | C'YCGRG |
| Bsp1286I | T'CCGGA |
| Bsp1407I | C'CATGG |
| Bsp1720I | GACNNNNNNTGGNNNNNNNNNNNN' |
| BspACI | CCANNNNNNGTCNNNNNNNNNNNNN' |
| BspCNI | TCG'CGA |
| BspDI | TT'CGAA |
| BspD6I | G'GGCCC |
| BspEI | 'GATC |
| BspFNI | GDGCH'C |
| BspGI | T'GTACA |
| BspHI | GC'TNAGC |
| BspLI | C'CGC |
| BspMI | CTCAGNNNNNNNNN' |
| BspNCI | AT'CGAT |
| BspOI | GACTCNNNN'NN |
| BspPI | T'CCGGA |
| BspQI | CG'CG |
| BspTI | CTGGAC |
| BspT104I | T'CATGA |
| BspT107I | GGN'NCC |
| BspTNI | ACCTGCNNNN'NNNN |
| BsrI | CCAGA |
| BsrBI | GCTAG'C |
| BsrDI | GGATCNNNN'N |
| BsrFI | GCTCTTCN'NNN |
| BsrGI | C'TTAAG |
| BsrSI | TT'CGAA |
| BssAI | G'GYRCC |
| BssECI | GGTCTCN'NNNN |
| BssHII | ACTGGN' |
| BssKI | CCG'CTC |
| BssMI | GCAATGNN' |
| BssNI | R'CCGGY |
| BssNAI | T'GTACA |
| BssSI | ACTGGN' |
| BssT1I | R'CCGGY |
| Bst6I | C'CNNGG |
| Bst98I | G'CGCGC |
| Bst1107I | 'CCNGG |
| BstACI | 'GATC |
| BstAFI | GR'CGYC |
| BstAPI | GTA'TAC |
| BstAUI | C'ACGAG |
| BstBI | C'CWWGG |
| Bst2BI | CTCTTCN'NNN |
| BstBAI | C'TTAAG |
| Bst4CI | GTA'TAC |
| BstC8I | GR'CGYC |
| BstDEI | C'TTAAG |
| BstDSI | GCANNNN'NTGC |
| BstEII | T'GTACA |
| BstENI | TT'CGAA |
| BstF5I | C'ACGAG |
| BstFNI | YAC'GTR |
| BstH2I | ACN'GT |
| BstHHI | GCN'NGC |
| BstKTI | C'TNAG |
| BstMAI | C'CRYGG |
| BstMBI | G'GTNACC |
| BstMCI | CCTNN'NNNAGG |
| BstMWI | GGATGNN' |
| BstNI | CG'CG |
| BstNSI | RGCGC'Y |
| BstOI | GCG'C |
| BstPI | GAT'C |
| BstPAI | GTCTCN'NNNN |
| BstSCI | 'GATC |
| BstSFI | CGRY'CG |
| BstSLI | GCNNNNN'NNGC |
| BstSNI | CC'WGG |
| BstUI | RCATG'Y |
| Bst2UI | CC'WGG |
| BstV1I | G'GTNACC |
| BstV2I | GACNN'NNGTC |
| BstXI | 'CCNGG |
| BstX2I | C'TRYAG |
| BstYI | GKGCM'C |
| BstZI | TAC'GTA |
| BstZ17I | CG'CG |
| BsuI | CC'WGG |
| Bsu15I | GCAGCNNNNNNNN'NNNN |
| Bsu36I | GAAGACNN'NNNN |
| BsuRI | CCANNNNN'NTGG |
| BsuTUI | R'GATCY |
| BtgI | R'GATCY |
| BtgZI | C'GGCCG |
| BthCI | GTA'TAC |
| BtrI | GTATCCNNNNNN' |
| BtsI | AT'CGAT |
| BtsCI | CC'TNAGG |
| BtuMI | GG'CC |
| BveI | AT'CGAT |
| Cac8I | C'CRYGG |
| CaiI | GCGATGNNNNNNNNNN'NNNN |
| CciI | GCNG'C |
| CciNI | CAC'GTC |
| CdiI | GCAGTGNN' |
| CdpI | GGATGNN' |
| CelII | TCG'CGA |
| CfoI | ACCTGCNNNN'NNNN |
| CfrI | GCN'NGC |
| Cfr9I | CAGNNN'CTG |
| Cfr10I | T'CATGA |
| Cfr13I | GC'GGCCGC |
| Cfr42I | CATC'G |
| ChaI | GCGGAGNNNNNNNNNNNNNNNNNNNN' |
| CjeI | GC'TNAGC |
| CjeNII | GCG'C |
| CjePI | Y'GGCCR |
| CjeP659IV | C'CCGGG |
| CjuI | R'CCGGY |
| CjuII | G'GNCC |
| ClaI | CCGC'GG |
| CpoI | GATC' |
| CseI | CCANNNNNNGTNNNNNNNNNNNNNNN' |
| CsiI | ACNNNNNNTGGNNNNNNNNNNNNNN' |
| CspI | GAGNNNNNGT |
| Csp6I | CCANNNNNNNTCNNNNNNNNNNNNNN' |
| Csp45I | GANNNNNNNTGGNNNNNNNNNNNNN' |
| CspAI | CACNNNNNNNGAA |
| CspCI | CAYNNNNNRTG |
| CstMI | CAYNNNNNCTC |
| CviAII | AT'CGAT |
| CviJI | CG'GWCCG |
| CviKI-1 | GACGCNNNNN'NNNNN |
| CviQI | A'CCWGGT |
| DdeI | CG'GWCCG |
| DinI | G'TAC |
| DpnI | TT'CGAA |
| DpnII | A'CCGGT |
| DraI | CAANNNNNGTGGNNNNNNNNNNNN' |
| DraII | CCACNNNNNTTGNNNNNNNNNNNNN' |
| DraIII | AAGGAGNNNNNNNNNNNNNNNNNNNN' |
| DraRI | C'ATG |
| DrdI | RG'CY |
| DrdII | RG'CY |
| DrdIV | G'TAC |
| DriI | C'TNAG |
| DseDI | GGC'GCC |
| EaeI | GA'TC |
| EagI | 'GATC |
| Eam1104I | TTT'AAA |
| Eam1105I | RG'GNCCY |
| EarI | CACNNN'GTG |
| EciI | CAAGNACNNNNNNNNNNNNNNNNNNNN' |
| Ecl136II | GACNNNN'NNGTC |
| EclXI | GAACCA |
| Eco24I | TACGACNNNNNNNNNNNNNNNNNNNN' |
| Eco31I | GACNNN'NNGTC |
| Eco32I | GACNNNN'NNGTC |
| Eco47I | Y'GGCCR |
| Eco47III | C'GGCCG |
| Eco52I | CTCTTCN'NNN |
| Eco57I | GACNNN'NNGTC |
| Eco72I | CTCTTCN'NNN |
| Eco81I | GGCGGANNNNNNNNNNN' |
| Eco88I | GAG'CTC |
| Eco91I | C'GGCCG |
| Eco105I | GRGCY'C |
| Eco130I | GGTCTCN'NNNN |
| Eco147I | GAT'ATC |
| EcoHI | G'GWCC |
| EcoICRI | AGC'GCT |
| Eco57MI | C'GGCCG |
| EcoNI | CTGAAGNNNNNNNNNNNNNNNN' |
| EcoO65I | CAC'GTG |
| EcoO109I | CC'TNAGG |
| EcoRI | C'YCGRG |
| EcoRII | G'GTNACC |
| EcoRV | TAC'GTA |
| EcoT14I | C'CWWGG |
| EcoT22I | AGG'CCT |
| EcoT38I | 'CCSGG |
| Eco53kI | GAG'CTC |
| EgeI | CTGRAGNNNNNNNNNNNNNNNN' |
| EheI | CCTNN'NNNAGG |
| ErhI | G'GTNACC |
| EsaBC3I | RG'GNCCY |
| EsaSSI | G'AATTC |
| Esp3I | 'CCWGG |
| FaeI | GAT'ATC |
| FaiI | C'CWWGG |
| FalI | ATGCA'T |
| FaqI | GRGCY'C |
| FatI | GAG'CTC |
| FauI | GGC'GCC |
| FauNDI | GGC'GCC |
| FbaI | C'CWWGG |
| FblI | TC'GA |
| FinI | GACCAC |
| FmuI | CGTCTCN'NNNN |
| Fnu4HI | CATG' |
| FokI | YA'TR |
| FriOI | AAGNNNNNCTTNNNNNNNNNNNNN' |
| FseI | GGGACNNNNNNNNNN'NNNN |
| FspI | 'CATG |
| FspAI | CCCGCNNNN'NN |
| FspBI | CA'TATG |
| FspEI | T'GATCA |
| Fsp4HI | GT'MKAC |
| GdiII | GGGAC |
| GlaI | GGNC'C |
| GluI | GC'NGC |
| GsaI | GGATGNNNNNNNNN'NNNN |
| GsuI | GRGCY'C |
| HaeI | GGCCGG'CC |
| HaeII | TGC'GCA |
| HaeIII | RTGC'GCAY |
| HaeIV | C'TAG |
| HapII | CCNNNNNNNNNNNN'NNNN |
| HgaI | GC'NGC |
| HgiEII | C'GGCCR |
| HhaI | GC'GC |
| Hin1I | GC'NGC |
| Hin1II | CCCAG'C |
| Hin4I | CTGGAGNNNNNNNNNNNNNNNN' |
| Hin6I | WGG'CCW |
| HinP1I | RGCGC'Y |
| HincII | GG'CC |
| HindII | GAYNNNNNRTCNNNNNNNNNNNNNN' |
| HindIII | GAYNNNNNRTCNNNNNNNNNNNNN' |
| HinfI | C'CGG |
| HpaI | GACGCNNNNN'NNNNN |
| HpaII | ACCNNNNNNGGT |
| HphI | GCG'C |
| Hpy8I | GR'CGYC |
| Hpy99I | CATG' |
| Hpy166II | GAYNNNNNVTCNNNNNNNNNNNNN' |
| Hpy188I | GABNNNNNRTCNNNNNNNNNNNNN' |
| Hpy188III | G'CGC |
| HpyAV | G'CGC |
| HpyCH4III | GTY'RAC |
| HpyCH4IV | GTY'RAC |
| HpyCH4V | A'AGCTT |
| HpyF3I | G'ANTC |
| HpyF10VI | GTT'AAC |
| Hsp92I | C'CGG |
| Hsp92II | GGTGANNNNNNNN' |
| HspAI | GTN'NAC |
| KasI | CGWCG' |
| KflI | GTN'NAC |
| KpnI | TCN'GA |
| Kpn2I | TC'NNGA |
| KspI | CCTTCNNNNNN' |
| Ksp22I | ACN'GT |
| KspAI | A'CGT |
| Kzo9I | TG'CA |
| LguI | C'TNAG |
| LlaGI | GCNNNNN'NNGC |
| LpnI | GR'CGYC |
| LpnPI | CATG' |
| Lsp1109I | G'CGC |
| LweI | G'GCGCC |
| MabI | GG'GWCCC |
| MaeI | GGTAC'C |
| MaeII | T'CCGGA |
| MaeIII | CCGC'GG |
| MalI | T'GATCA |
| MaqI | GTT'AAC |
| MauBI | 'GATC |
| MbiI | GCTCTTCN'NNN |
| MboI | CTNGAYG |
| MboII | RGC'GCY |
| McaTI | CCDGNNNNNNNNNN'NNNN |
| MfeI | GCAGCNNNNNNNN'NNNN |
| MflI | GCATCNNNNN'NNNN |
| MhlI | A'CCWGGT |
| MjaIV | C'TAG |
| MlsI | A'CGT |
| MluI | 'GTNAC |
| MluNI | GA'TC |
| MlyI | CRTTGACNNNNNNNNNNNNNNNNNNNNN' |
| Mly113I | CG'CGCGCG |
| MmeI | CCG'CTC |
| MnlI | 'GATC |
| Mph1103I | GAAGANNNNNNNN' |
| MreI | GCGC'GC |
| MroI | C'AATTG |
| MroNI | R'GATCY |
| MroXI | GDGCH'C |
| MscI | GTNNAC |
| MseI | TGG'CCA |
| MslI | A'CGCGT |
| MspI | TGG'CCA |
| Msp20I | GAGTCNNNNN' |
| MspA1I | GG'CGCC |
| MspCI | TCCRACNNNNNNNNNNNNNNNNNNNN' |
| MspJI | CCTCNNNNNNN' |
| MspR9I | ATGCA'T |
| MssI | CG'CCGGCG |
| MunI | T'CCGGA |
| MvaI | G'CCGGC |
| Mva1269I | GAANN'NNTTC |
| MvnI | TGG'CCA |
| MvrI | T'TAA |
| MwoI | CAYNN'NNRTG |
| NaeI | C'CGG |
| NarI | TGG'CCA |
| NciI | CMG'CKG |
| NcoI | C'TTAAG |
| NdeI | CNNRNNNNNNNNN'NNNN |
| NdeII | CC'NGG |
| NgoAVIII | GTTT'AAAC |
| NgoMIV | C'AATTG |
| NhaXI | CC'WGG |
| NheI | GAATGCN' |
| NlaIII | CG'CG |
| NlaIV | CGAT'CG |
| NlaCI | GCNNNNN'NNGC |
| Nli3877I | GCC'GGC |
| NmeAIII | GG'CGCC |
| NmeDI | CC'SGG |
| NmuCI | C'CATGG |
| NotI | CA'TATG |
| NruI | 'GATC |
| NsbI | GACNNNNNTGANNNNNNNNNNNNN' |
| NsiI | TCANNNNNGTCNNNNNNNNNNNNNN' |
| NspI | G'CCGGC |
| NspV | CAAGRAG |
| OliI | G'CTAGC |
| PabI | CATG' |
| PacI | GGN'NCC |
| PaeI | CATCACNNNNNNNNNNNNNNNNNNN' |
| PaeR7I | CYCGR'G |
| PagI | GCCGAGNNNNNNNNNNNNNNNNNNNNN' |
| PalAI | RCCGGYNNNNNNN'NNNNN |
| PasI | 'GTSAC |
| PauI | GC'GGCCGC |
| PceI | TCG'CGA |
| PciI | TGC'GCA |
| PciSI | ATGCA'T |
| PcsI | RCATG'Y |
| PctI | TT'CGAA |
| PdiI | CACNN'NNGTG |
| PdmI | GTA'C |
| PfeI | TTAAT'TAA |
| Pfl23II | GCATG'C |
| Pfl1108I | C'TCGAG |
| PflFI | T'CATGA |
| PflMI | GG'CGCGCC |
| PfoI | CC'CWGGG |
| PhoI | G'CGCGC |
| PinAI | AGG'CCT |
| PlaDI | A'CATGT |
| PleI | GCTCTTCN'NNN |
| Ple19I | WCGNNNN'NNNCGW |
| PmaCI | GAATGCN' |
| PmeI | GCC'GGC |
| PmlI | GAANN'NNTTC |
| PpiI | G'AWTC |
| PpsI | C'GTACG |
| Ppu10I | TCGTAG |
| Ppu21I | GACN'NNGTC |
| PpuMI | CCANNNN'NTGG |
| PscI | T'CCNGGA |
| PshAI | GG'CC |
| PshBI | A'CCGGT |
| PsiI | CATCAGNNNNNNNNNNNNNNNNNNNNN' |
| Psp03I | GAGTCNNNN'N |
| Psp5II | CGAT'CG |
| Psp6I | CAC'GTG |
| Psp1406I | GTTT'AAAC |
| Psp124BI | CAC'GTG |
| PspCI | GAACNNNNNCTCNNNNNNNNNNNNN' |
| PspEI | GAGNNNNNGTTCNNNNNNNNNNNN' |
| PspGI | GAGTCNNNN'N |
| PspLI | A'TGCAT |
| PspN4I | YAC'GTR |
| PspOMI | RG'GWCCY |
| PspOMII | A'CATGT |
| PspPI | GACNN'NNGTC |
| PspPPI | AT'TAAT |
| PspPRI | TTA'TAA |
| PspXI | GGWC'C |
| PsrI | RG'GWCCY |
| PssI | 'CCWGG |
| PstI | AA'CGTT |
| PstNI | GAGCT'C |
| PsuI | CAC'GTG |
| PsyI | G'GTNACC |
| PteI | 'CCWGG |
| PvuI | C'GTACG |
| PvuII | GGN'NCC |
| RcaI | G'GGCCC |
| RceI | CGCCCARNNNNNNNNNNNNNNNNNNNN' |
| RgaI | G'GNCC |
| RigI | RG'GWCCY |
| RleAI | CCYCAGNNNNNNNNNNNNNNN' |
| RpaBI | VC'TCGAGB |
| RpaB5I | GAACNNNNNNTACNNNNNNNNNNNN' |
| RruI | GTANNNNNNGTTCNNNNNNNNNNNN' |
| RsaI | RGGNC'CY |
| RsaNI | CTGCA'G |
| RseI | CAGNNN'CTG |
| RsrII | R'GATCY |
| Rsr2I | GACN'NNGTC |
| SacI | G'CGCGC |
| SacII | CGAT'CG |
| SalI | CAG'CTG |
| SapI | T'CATGA |
| SaqAI | CATCGACNNNNNNNNNNNNNNNNNNNN' |
| SatI | GCGAT'CGC |
| Sau96I | GGCCGG'CC |
| Sau3AI | CCCACANNNNNNNNNNNN' |
| SbfI | CCCGCAGNNNNNNNNNNNNNNNNNNNN' |
| ScaI | CGRGGACNNNNNNNNNNNNNNNNNNNN' |
| SchI | TCG'CGA |
| SciI | GT'AC |
| ScrFI | G'TAC |
| SdaI | CAYNN'NNRTG |
| SdeAI | CG'GWCCG |
| SdeOSI | CG'GWCCG |
| SduI | GAGCT'C |
| SelI | CCGC'GG |
| SetI | G'TCGAC |
| SexAI | GCTCTTCN'NNN |
| SfaAI | T'TAA |
| SfaNI | GC'NGC |
| SfcI | G'GNCC |
| SfiI | 'GATC |
| SfoI | CCTGCA'GG |
| Sfr274I | AGT'ACT |
| Sfr303I | GAGTCNNNNN' |
| SfuI | CTC'GAG |
| SgeI | CC'NGG |
| SgfI | CCTGCA'GG |
| SgrAI | CAGRAGNNNNNNNNNNNNNNNNNNNNN' |
| SgrBI | GACNNNNRTGANNNNNNNNNNNN' |
| SgrDI | TCAYNNNNGTCNNNNNNNNNNNNN' |
| SgsI | GDGCH'C |
| SimI | 'CGCG |
| SinI | ASST' |
| SlaI | A'CCWGGT |
| SmaI | GCGAT'CGC |
| SmiI | GCATCNNNNN'NNNN |
| SmiMI | C'TRYAG |
| SmlI | GGCCNNNN'NGGCC |
| SmoI | GGC'GCC |
| SmuI | C'TCGAG |
| SnaI | CCGC'GG |
| SnaBI | TT'CGAA |
| SpeI | CNNGNNNNNNNNN'NNNN |
| SphI | GCGAT'CGC |
| SpoDI | CR'CCGGYG |
| SrfI | CCGC'GG |
| Sse9I | CG'TCGACG |
| Sse8387I | GG'CGCGCC |
| Sse8647I | GG'GTC |
| SseBI | G'GWCC |
| SsiI | C'TCGAG |
| SspI | CCC'GGG |
| SspDI | ATTT'AAAT |
| SspD5I | CAYNN'NNRTG |
| SstI | C'TYRAG |
| SstII | C'TYRAG |
| SstE37I | CCCGCNNNN'NN |
| Sth132I | GTATAC |
| Sth302II | TAC'GTA |
| StrI | A'CTAGT |
| StsI | GCATG'C |
| StuI | GCGGRAG |
| StyI | GCCC'GGGC |
| StyD4I | 'AATT |
| SwaI | CCTGCA'GG |
| TaaI | AG'GWCCT |
| TaiI | AGG'CCT |
| TaqI | C'CGC |
| TaqII | AAT'ATT |
| TasI | G'GCGCC |
| TatI | GGTGANNNNNNNN' |
| TauI | GAGCT'C |
| TfiI | CCGC'GG |
| TliI | CGAAGACNNNNNNNNNNNNNNNNNNNN' |
| Tru1I | CCCGNNNN'NNNN |
| Tru9I | CC'GG |
| TscAI | C'TCGAG |
| TseI | GGATGNNNNNNNNNN'NNNN |
| TsoI | AGG'CCT |
| Tsp45I | C'CWWGG |
| Tsp509I | 'CCNGG |
| TspDTI | ATTT'AAAT |
| TspEI | ACN'GT |
| TspGWI | ACGT' |
| TspMI | T'CGA |
| TspRI | GACCGANNNNNNNNNNN' |
| TssI | CACCCANNNNNNNNNNN' |
| TstI | 'AATT |
| TsuI | W'GTACW |
| Tth111I | GCSG'C |
| Tth111II | G'AWTC |
| UbaF9I | C'TCGAG |
| UbaF11I | T'TAA |
| UbaF12I | T'TAA |
| UbaF13I | CASTGNN' |
| UbaF14I | G'CWGC |
| UbaPI | TARCCANNNNNNNNNNN' |
| UnbI | 'GTSAC |
| Van91I | 'AATT |
| Vha464I | ATGAANNNNNNNNNNN' |
| VneI | 'AATT |
| VpaK11AI | ACGGANNNNNNNNNNN' |
| VpaK11BI | C'CCGGG |
| VspI | CASTGNN' |
| XagI | GAGNNNCTC |
| XapI | CACNNNNNNTCCNNNNNNNNNNNN' |
| XbaI | GGANNNNNNGTGNNNNNNNNNNNNN' |
| XceI | GCGAC |
| XcmI | GACN'NNGTC |
| XhoI | CAARCANNNNNNNNNNN' |
| XhoII | TACNNNNNRTGT |
| XmaI | TCGTA |
| XmaJI | CTACNNNGTC |
| XmiI | GAGNNNNNNCTGG |
| XmnI | CCANNNNNTCG |
| XspI | CGAACG |
| ZraI | 'GGNCC |
| ZrmI | CCANNNN'NTGG |
| Zsp2I | C'TTAAG |