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Account / Revue
Microbial interactions with actinides and long-lived fission products
Joanna C. Renshaw a , Jonathon R. Lloyd
b , Francis R. Livens
b,c,*
a School of Geography, Earth & Environmental Sciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK b School of Earth, Atmospheric & Environmental Sciences, University of Manchester, Manchester M13 9PL, UK
c School of Chemistry, University of Manchester, Manchester M13 9PL, UK
Received 28 September 2006; accepted after revision 13 February 2007
Abstract
Microorganisms have the potential to interact with a wide range of radioactive materials (both in solution and in insoluble phases) through the production of a diverse range of metabolites and biomolecules. Such interactions can significantly alter the chemical speciation of radionuclides and so impact their reactivity and solubility in the environment. Much research has focussed on microbially mediated redox transformations, which can alter the redox chemistry of actinides and technetium through direct and indirect mechanisms, significantly affecting their environmental solubility and mobility. Recent studies have investigated the pos- sible exploitation of these transformations to remediate uranium-contaminated land. This review examines the influence of micro- bial transformations on the biogeochemistry of actinide ions and technetium. To cite this article: J.C. Renshaw et al., C. R. Chimie X (2007). � 2007 Published by Elsevier Masson SAS on behalf of Académie des sciences.
Resume
En produisant divers métabolites et biomolécules, les microorganismes sont capables d’intéragir avec de nombreux composés radioactifs (à la fois en solution et en milieu insoluble). De telles interactions peuvent fortement modifier la spéciation des radio- nucléides et ainsi agir sur leur réactivité et leur solubilité dans l’environnement. De nombreuses études se sont concentrées sur les transformations redox en milieu microbien. Celles-ci peuvent modifier la chimie redox des actinides et du technétium par des mé- canismes directs et indirects et affecter de manière significative leur solubilité et leur mobilité dans l’environnement. La possibilité d’exploiter ces transformations afin de réduire la contamination des sols contaminés à l’uranium a été étudiée récemment. L’influ- ence des transformations microbiennes sur la biogéochimie des ions actinides et du technétium est traitée dans cette revue. Pour citer cet article : J.C. Renshaw et al., C. R. Chimie X (2007). � 2007 Published by Elsevier Masson SAS on behalf of Académie des sciences.
* Corresponding author. School of Earth, Atmospheric & Environmental Sciences, University of Manchester, Manchester M13 9PL, UK.
E-mail addresses: [email protected] (J.C. Renshaw), [email protected] (J.R. Lloyd), [email protected] (F. R. Livens).
1631-0748/$ - see front matter � 2007 Published by Elsevier Masson SAS on behalf of Académie des sciences. doi:10.1016/j.crci.2007.02.013
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Keywords: Nuclear waste; Uranium; Speciation; Bioremediation; Microbial reduction
Mots-clés : Déchets nucléaires ; Uranium ; Spéciation ; Bioremédiation ; Réduction microbienne
1. Introduction
1.1. Background
Microorganisms have adapted to live in virtually ev- ery terrestrial or aquatic environment encountered on Earth, including radioactively contaminated environ- ments. Microbial metabolic processes can influence their local environment, for example, through changing pH and Eh conditions, and can affect radionuclide spe- ciation via a number of mechanisms. In particular, mi- crobial redox reactions in subsurface environments, and their impact on biogeochemical cycles, have re- ceived much attention recently. Several important, long-lived radioactive elements have complex redox chemistries which can interact with subsurface biogeo- chemical cycles leading to changes in radionuclide mo- bility. Here, we discuss the chemical, microbiological and geochemical influences on these processes.
1.2. Chemical aspects
Chemical speciation (oxidation state, complex form) is a fundamental control on the behaviour of any solute, defining properties such as solubility or reactivity with respect to surfaces. The importance of chemical speci- ation can be seen clearly in, for example, the differential solubilities of U and Th in seawater. The atom ratio U:Th on the Earth’s crust is about 1:4, yet that in seawa- ter is 64,000:1 [1,2] and this difference arises entirely from the different speciation of the two elements. At their most fundamental, both oxidation state stability and complex formation are driven by equilibrium ther- modynamics, specifically the Gibbs Free Energy change which allows rationalisation of a diverse range of observations (see e.g. Ref. [3]).
The simplest equilibrium process is homogeneous complex formation, as in the well known example of the UO2
2þ/CO3 2�/OH� system (Clark et al. [4] and refer-
ences therein) where, as pH (and hence free CO3 2�)
increases, the system is dominated successively by the complex ions [UO2(CO3)], [UO2(CO3)2]
2� and [UO2 (CO3)3]
4� (Fig. 1). The formation of each complex can be quantified using a straightforward equilibrium constant.
The situation is perhaps more complex in heteroge- neous reactions, such as hydrolysis, where reaction
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may lead to a change in solubility. Pu(IV) provides an excellent, if complicated, example [5]. As the pH in- creases (and hence the Pu:OH� ratio decreases), the system becomes dominated by [Pu(OH)]4 and these species react to form a high molecular weight polymer, eventually leading to precipitation [6,7]. For the ther- modynamic description of a reaction to be valid, the transformation has to be reversible but, in the case of Pu(IV), the initial polymerisation reaction is followed by a series of aggregation and dehydration steps so that it is not possible to describe Pu(IV) hydrolysis by a single equilibrium constant, as it was for the UO2
2þ/CO3 2� complexes. The thermodynamics of Pu(IV)
hydrolysis led to considerable controversy in the early literature although more recent work has clarified the
Fig. 1. Calculated uranyl species distributions in carbonate solutions
used as models for Yucca Mountain groundwaters (from Ref. [4]).
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issue considerably. Moreover, because the solid phase transformations can be slow, it can be very difficult to know if the system has reached equilibrium. In these sit- uations, thermodynamic analysis, with its requirement for equilibrium, can only be an approximation and time-dependent effects can be observed; for example, aged Pu polymer is much more difficult to redissolve than freshly precipitated material [8e10].
An understanding of redox transformations is also important. Some transformations are straightforward and involve just electron transfer, for example, U(IV)/ U(III) in strong acid solution, where the reaction is simply:
U4þðaqÞ þ e � / U3þðaqÞ ð1Þ
Others are more complicated, with the making or breaking of chemical bonds being intimately associated with electron transfer. The reduction of Np(V) to Np(IV) in acid medium is an example, and this process can be described:
NpOþ2 ðaqÞ þ 4H þ ðaqÞ þ e
� / Np4þðaqÞ þ 2H2O ð2Þ
Redox reactions are described using standard poten- tials (E0), which are measured in standard state condi- tions, generally strong acid. Obviously, a reaction such as reduction of Np(V), in which protons are in- volved will display a strong dependency on pH (the equilibrium constant will include [Hþ]4) so that the po- tential at which Np(IV) becomes thermodynamically favoured over Np(V) will change with pH. This rela- tionship is described using the Nernst equation:
E ¼ E0 � RT
nF ln K
where E is the redox potential, E0 the standard po- tential, R the gas constant, T the absolute temp- erature, n the number of moles of electrons transferred, F Faraday’s constant and K is the equi- librium constant for the redox reaction. We can also relate redox potentials directly to Gibbs Free Energy changes. However, the Nernst equation im- plies that, in order to use a thermodynamic analysis, we need to understand the redox reaction in suffi- cient detail to define and quantify the relevant equi- librium constant. For example, reaction (1) may be a good description of the uranium(III/IV) redox reac- tion at low pH but, at a higher pH, the U(IV) may be hydrolysed and the actual transformation might be better described as:
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UðOHÞ4ðaqÞ þ e � / UðOHÞ3ðaqÞ þ OH
�: ð3Þ
The redox potential for this process will be different from that for reaction (1) (�2.14 and �0.596 V, respec- tively [11]), not least because we have a different trans- formation with a different equilibrium constant. Similar effects are observed with ligands other than hydroxide; for example, the U(VI)/U(V) potential shifts from �0.169 V in the presence of CO32� to �0.820 V in its absence [12]. Thus, from the perspective of possible biotransformations, there are two different ways to drive the redox transformation of a metal ion. It is pos- sible either to control electron activity or to complex the ion (through production of a complexant or presenting a specific binding site) in such a way that the redox po- tential will shift and permit the required redox reaction to occur at the prevailing electron activity.
The aqueous speciation of the mid-actinide elements (U, Np, Pu) is amongst the most complex known (see e.g. Silva and Nitsche [13] and references therein). Ox- idation states þ3 to þ6 are known for U, and þ3 to þ7 for Np and Pu (þ8 is also suggested but not definitively identified for Pu). In environmentally attainable redox conditions, which is a window effectively defined by the chemical stability of water, the oxidation states U(IV,V,VI), Np(IV,V) and Pu(III,IV,V) might realisti- cally be attainable. Oxidation states þ3 and þ4 form simple ions in solution and, due to their high charge and relatively small size, they are readily hydrolysed. Oxidation states þ5 and þ6 form the stable, linear di- oxo ions AnO2
þ/2þ (actinyl ions), where An denotes an U, Np or Pu center. Some actinide species, notably U(V), Pu(IV) and Pu(V), are susceptible to dispropor- tionation because the redox potential for self-oxidation is similar to that for self-reduction. Thus, the reaction
2Pu4þðaqÞ þ 2H2O / Pu 3þ ðaqÞ þ PuO
þ 2 ðaqÞ þ 2H
þ ðaqÞ ð4Þ
will occur spontaneously. The position of the equilib- rium is strongly affected by [Hþ], with acidic condi- tions stabilizing Pu(IV).
All the actinide cations which might realistically be encountered in environmental conditions react readily with complexing ligands, particularly those containing ‘‘hard’’ donor atoms such as oxygen. Thus, relatively simple species such as CO3
2� and CH3CO2 � are effective
complexants, while more complex molecules such as citrate or siderophores, which can be produced biolog- ically, also bind actinide cations strongly. The general trend in complex stability is:
An4þ > An3þ z AnO2þ2 > AnO þ 2
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Because of the stability of the linear actinyl ions, complex formation with these species is essentially confined to the equatorial plane whereas the simple An3þ or An4þ ions do not impose comparable stereochemical restrictions. Polydentate ligands such as citrate can, therefore, wrap around the lower oxida- tion state ions in a way which is not possible for actinyl species. In the case of Pu, relevant potential transforma- tions are discussed in Neu et al. [14].
1.3. Radioactively contaminated land
Nuclear fuel cycle activities have created large vol- umes of contaminated land in many places. Reprocess- ing activities, particularly those associated with military Pu production, perhaps have the highest profile (e.g. Mayak in the Former Soviet Union, Hanford in the USA, Sellafield in the UK) and present some difficult challenges because of the presence of complex mixtures of contaminants (e.g. U, transuranic elements, fission and activation products, perhaps with stable metallic and organic co-contaminants). However, by volume, the dominant contaminated land problem is presented by uranium, particularly uranium mining and ore pro- cessing sites. These include localities in central Europe, the USA, Australia, South Africa, Namibia, Canada and the Former Soviet Union.
The scale of uranium mining wastes is very large and can be illustrated by examining the legacy of the mining operations in the former East Germany. This is contiguous with ore deposits in the Czech Republic, which have also been extensively exploited and an ex- cellent account is given by Diehl [15]. This region is the third largest uranium mining province on Earth and, between 1946 and 1990, produced around 320,000 tonnes of uranium, often from ores with a grade of only about 0.1%. Ores were extracted and processed conventionally, leaving waste piles which are up to 350 ha in area and contain tens of millions of cubic metres of material. Heap leaching of lower grade ores also occurred, with individual heaps con- taining up to 7 million tonnes of ore. Finally, in situ leaching was also used. This involves pumping a suit- able extractant (often H2SO4 in this case) through po- rous, uranium-bearing rock and extracting uranium from the leachate. The legacy of these operations in- cludes large volumes of both surface and subsurface contamination. While the details of operations may vary from site to site, and the former East German ex- ample may be more extreme than many, it illustrates the scale and complexity of the work required for ura- nium mine remediation.
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1.4. Microbiological aspects
1.4.1. Microorganisms in radioactive environments A wide range of bacteria, both bacteria and fungi,
have been found growing in environments contami- nated with radionuclides (e.g. Zhdanova et al. and Na- zina [16,17]). These habitats vary from uranium mining and milling sites [18e20], with relatively low levels of radiation, to spent fuel basins [21] and inside the reactor installations at the Chernobyl Nuclear Power Plant [16,22], where microorganisms will be ex- posed to much higher levels of radiation. For example, Chicote et al. [23] characterized microorganisms at- tached to the walls of a pool storing nuclear materials at a Spanish nuclear power plant. Six different bacteria (affiliated to b-proteobacteria, Actinomycetales and the Bacillus/Staphylococcus groups) and a fungus (Asper- gillus sp.) were identified from the isolates using mo- lecular analysis of the 16S and 18S ribosomal RNA genes, respectively. Zhdanova et al. [16,22,24,25] have extensively investigated the fungal communities growing in and around the Chernobyl Nuclear Power Plant. They found extensive fungal growth in the inner parts of the protective shelter erected over the damaged reactor unit [16]. In total, w2000 strains of fungi, rep- resenting 200 species in 98 different genera, have been found in and around Chernobyl. Depending on loca- tion, the isolates have been exposed to a wide range of ionizing radiation, with doses up to 700 Gy h�1, and this exposure has resulted in the altered genetic composition of some organisms [25,26]. Both pro- posed and ‘‘in-use’’ repositories for nuclear waste have also been investigated [17,27,28], as the microbial community present in such environments could affect the long-term stability and mobility of the wastes. The Severnyi repository in Eastern Siberia is used for the storage of low-level liquid waste. Liquid radioac- tive waste has been stored at the site since 1967 and is injected into subsurface horizons. A range of anaer- obic prokaryotes including denitrifiers, fermenters, sul- phate-reducers and methanogens were cultured from water samples collected from the repository [17]. The numbers of cultivable cells were higher for all the dif- ferent groups of bacteria, for samples taken from the zone of radioactive waste dispersion, compared to sam- ples taken from outside the zone of dispersion. Organ- isms isolated were capable of utilizing a wide range of organic and inorganic substrates, including compo- nents of the waste such as acetate, sulphate and nitrate. This ability to use some of the waste is perhaps re- flected in the higher cell numbers obtained in the zone of dispersion.
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As can be seen from these examples, microorgan- isms are ubiquitous in radioactive environments and there are a range of microbial metabolic processes that can affect the chemical speciation of radionuclides. For example, ligands secreted by microorganisms, ei- ther for a specific purpose (as in the case of sidero- phores produced to obtain iron) or as a by-product of metabolism, can chelate actinide ions and so directly al- ter the chemical speciation. This can impact solubility, leading to precipitation of the radionuclide or increased solubility, and can affect the redox potential. Here, the different microbial mechanisms for transforming radio- nuclides are described.
1.4.2. Biosorption Biosorption is defined as the microbial uptake of
metal species by physicochemical mechanisms, for ex- ample, adsorption [29]. It is a metabolic-independent process, and so both living and dead microbial biomass can biosorb metals, however, metabolic activity may af- fect the process, e.g. by causing localized changes in Eh or pH, or by secreting metal-complexing ligands. Bio- sorption of metals, including radionuclides, has been studied for more than two decades, and reviewed exten- sively during this period [30e32]. More recent studies have confirmed that a wide range of microorganisms, including bacteria, fungi, lichens and algae, are capable of biosorbing radionuclides [33e37]. Most studies have investigated sorption of U(VI), although sorption of Pu, Am, Np, Th and Tc species have also been studied to a limited extent recently [34,38e43]. Songkasiri et al. [38] investigated sorption of NpO2
þ by the bacterium Pseudomonas aeruginosa. With initial Np solution con- centrations of w3.67 mM and biomass concentrations equivalent to 106 mg/l dry weight biomass, 50e65% of Np was removed from solution over the pH range 6e8. The only study on biosorption of TcO4
� investi- gated cyanobacteria [44]. TcO4
� sorption was concen- tration-dependent and found to increase as pH decreased. All sorbed Tc(VII) was easily desorbed.
Sorption can be either to the cell wall or to extracel- lular components, for example polysaccharides, glyco- proteins or lipopolysaccharides (LPS), associated with the cell wall. A range of functional groups are found in these cell walls and exopolymers, including carbox- ylate, phosphate, amino and hydroxyl groups. The cell wall of Gram-positive bacteria is composed primarily of peptidoglycan with lesser amounts of other polymers such as teichoic acids; the most likely metal binding sites are the carboxyl groups in peptidoglycan and the phosphoryl groups in the teichoic acids [45]. In Gram-negative bacteria, the cell wall architecture is
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more complex, as the cells have an additional outer membrane (as well as the cytoplasmic cellular mem- brane found in all bacteria) with lipopolysaccharide (LPS) groups outside a thin peptidoglycan cell wall. Phosphoryl groups in the LPS are the most probable sites of metal complexation in these organisms [45,46]. A number of studies have investigated the mechanism of U(VI) sorption to bacterial cells and found evidence for coordination to both carboxyl and phosphoryl groups [47e51]. Merroun et al. [49] studied the sorption of U(VI) to Bacillus sphaericus JG-A12, a Gram-positive bacterium isolated from a uranium mining waste pile. The XAS results supported bidentate coordination of U(VI) to carboxyl groups and mono- dentate coordination to phosphoryl groups. Panak and Nitsche. [39] investigated sorption of Pu(VI) to another B. sphaericus strain, using XAS. Coordination was pri- marily to phosphate groups and there was no evidence for coordination to carboxyl groups. In fungi, chitin is an important structural component of the cell wall and has been found to be an effective sorbant for radionu- clides [29]. Binding of U(VI) is thought to be to amine groups in chitin [52,53] but there are other functional groups present in fungal polymers that would effec- tively bind radionuclides including carboxyl, phenolic and carbonyl [54].
1.4.3. Intraceullular uptake Most studies on the intracellular accumulation of ra-
dionuclides by microorganisms have focussed on the lighter radioelements such as Cs, Sr and Pb [55e57]. There have been relatively few investigations of intra- cellular accumulation of actinides and almost all of these have concentrated on U. Bacteria, fungi and algae have all been found to accumulate U intracellularly [33,58e61]. However, accumulation was often found to be independent of metabolism. For example, Volesky and May-Phillips [59] found U(VI) was accumulated both extra- and intracellularly by the yeast Saccharomyces cerevisiae. Uranium was deposited in fine, needle-like crystals and uptake was independent of metabolism. It has been suggested that this intracellular metabolism- independent uptake results from increased cell mem- brane permeability caused, for example, by the toxic effects of uranium [37]. In a more recent study, Suzuki and Banfield [62] investigated resistance to, and accu- mulation of uranium by bacteria isolated from acidic, uranium-contaminated land. In one isolate, closely re- lated to Arthrobacter ilicis, uranium was precipitated intracellularly in close association with polyphosphate granules. The cells of this isolate remained viable after accumulation of uranium. They proposed that the
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intracellular precipitation of uranium acts as a detoxi- fication mechanism. In one study, John et al. [63] reported the intracellular uptake of Pu(IV) in Microbacterium flavescens JG-9. This was an active, metabolism-dependent transport process, with Pu(IV) taken up as a Pu(IV)-desferrioxamine B complex via the siderophore-mediated Fe(III) transport system.
1.4.4. Bioleaching Microbial leaching of solid metal compounds occurs
either through redox transformations, reduction of pH or production of metal-chelating ligands. Leaching can result from both autotrophic and heterotrophic me- tabolism. Most autotrophic leaching is caused by che- molithotrophic, acidophilic bacteria. These organisms, such as Acidithiobacillus thiooxidans, Acidithiobacillus ferrooxidans and Leptospirillum ferrooxidans, use CO2 as their carbon source and obtain energy from the oxi- dation of reduced sulfur compounds or Fe(II) [29], gen- erating Fe(III) and/or H2SO4.
Metal solubilization can then occur indirectly through oxidation of the metal sulfide (Eq. (5)) or the metal itself by the microbially generated Fe(III).
MS2ðsÞ þ 14Fe3þðaqÞ þ 8H2O / M 2þ ðaqÞ þ 14Fe
2þ ðaqÞ
þ 2SO2�4 ðaqÞ þ 16H þ ð5Þ
The generation of sulfuric acid maintains a low pH and so keeps the liberated metal ions in solution.
The most well studied radionuclide with regard to microbial leaching is uranium, and in situ bioleaching of low-grade uranium ores is now an important method for extracting uranium [37,64]. Acidithiobacillus and Leptospirillum species are the principal organisms used for extracting U. The mechanisms are either direct oxidation of pitchblende (UO2) or indirect oxidation by Fe(III) (Eq. (6)):
UIVO2ðsÞ þ 2Fe3þðaqÞ / U VIO2þ2 ðaqÞ þ 2Fe
2þ ðaqÞ ð6Þ
Leaching can also result from heterotrophic metabo- lism and this is most important in the case of fungi [29]. Heterotrophic leaching is mainly caused by produc- tion of organic acids, but other processes, such as proton efflux and production of siderophores, can also cause it. Secreted organic acids serve as a source of both protons and metal-chelating ligands and have been found to leach radionuclides from solid forms. For example, citric acid is commonly produced by fungi [65,66]. Citrate forms very stable complexes with uranyl [67] and can leach Pu(IV) and Am(III) from soil particles [68]. The fungi
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Aspergillus ochraceous and Penicillium funiculosum were able to leach uranium from a range of U-bearing rocks and the mechanism of solubilization was attributed to production of citric and glutamic acids [69,70].
1.4.5. Biomineralization Radionuclides can be precipitated through the micro-
bial generation of ligands, for example, phosphate, sul- phide, carbonate and oxalate. Microbial ligand production causes a high localized ligand concentration around the cell, and the cell surface provides a nucleation site for precipitation, resulting in efficient removal of the radionuclide from solution. One of the most extensively studied systems is phosphate precipitation of radionu- clides using the bacterium Serratia (formerly Citrobacter [71]). Inorganic phosphate is generated from the hydro- lytic cleavage, by a phosphatase enzyme, of an organic phosphate e.g. glycerol-2-phosphate [72]. In studies us- ing Serratia to generate phosphate, U(VI), Am(III) and Th(IV) were found to be effectively removed from solu- tion [73e75]. In the case of Th(IV), removal from solu- tion was initially poor, as complexation of Th(IV) by citrate (present as a buffer) kept the metal ion in solution [75]. However, the addition of NH4
þ was found to signif- icantly enhance Th(IV) removal [74,75]. Up to 90% of Th(IV) was removed from a 300 mM Th(IV) solution, with the metal precipitating as thorium ammonium phos- phate. In contrast, Serratia was far less efficient at remov- ing Np(V) and Pu(IV) by phosphate precipitation [76]. However, Np(V) could be removed from solution by re- ducing Np(V) to Np(IV) [77] (see Section 2.1). Np(IV) then precipitates from solution as the phosphate. Np(V) and Pu(IV) could also be removed by using microbially synthesized LaPO4 (see below) [76].
In addition to direct precipitation by microbially generated ligands, actinide ions can also be removed from solution by biogenic minerals. Microbially en- hanced chemisorption of heavy metals (MECHM) is the process whereby microbial cells first precipitate a metal biomineral (‘‘priming deposit’’), which then acts as a nucleation focus, or ‘‘host crystal’’ for the sub- sequent deposition of the metal of interest [73,78]. Ex- amples of priming deposits include FeS, Fe(III) oxides and a range of biogenic metal phosphates (see above). FeS is formed when sulphate-reducing bacteria reduce sulphate to generate H2S, which then reacts with iron. The biogenic FeS can then sorb heavy metals and radio- nuclides [79]. Fe(III) oxides are made, for example, by aerobic and denitrifying Fe(II)-oxidising bacteria and can also sorb radionuclides [78,80]. One of the best studied example of MECHM involves the generation of phosphate priming minerals, such as hydrogen uranyl
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phosphate (HUP) or lanthanum phosphate by Serratia. Macaskie and Basnakova [76] used immobilized cells of Serratia to make cell-bound LaPO4, which then ef- fectively sorbed Np and Pu. The HUP crystal structure consists of sheets of uranyl phosphate ions separated by water molecules and accumulation of radionuclides can occur either through intercalation into the interlamellar space between the uranyl phosphate sheets, or, in the case of other hexavalent actinide ions, by displacing uranyl ions in the lattice backbone [78].
Although there is a range of mechanisms by which microbes can affect the chemical speciation of acti- nides, perhaps the most extensively studied process is microbially mediated redox transformations. These processes can have a profound impact on radionuclide solubilities and have been the focus of recent in situ re- mediation studies. The rest of this review concentrates on these redox transformations.
2. Redox transformations
In the context of subsurface biogeochemistry, micro- bial metabolism drives a wide range of redox transfor- mations. The starting point is the well established sequence of terminal electron acceptors (TEAs; e.g. [81]), which are exploited in the order of decreasing free energy yield (O2 > NO3
�> Mn(IV) > Fe(III) > SO4
2�> CO2). This is a useful, though simplified, anal- ysis since any natural system will be heterogeneous e resource quality will vary from place to place; porosity and permeability will be variable; and the microbial community will change both spatially and temporally. The net result is to create a mosaic of microenviron- ments within the system so that, at a fairly coarse scale, the TEA sequence can provide insight into biogeo- chemical changes but, at a finer scale, the concept becomes increasingly difficult to use.
Microbial activity can lead to redox changes through either direct or indirect mechanisms. In direct transformations, the trace species of interest, such as UO2
2þ or TcO4 �, can actually be exploited in metabo-
lism because the electron transport chain is sufficiently adaptable to use it as a TEA. Fe(III) is sometimes viewed as a model for U(VI) in biological systems [37] and a wide range of Fe(III)-reducing bacteria have been shown to reduce U(VI) as well. The first biochemical studies on U(VI) reduction focused on the sulphate-reducing bacterium Desulfovibrio vulga- ris, and identified a periplasmic cytochrome c3 as the terminal reductase for the radionuclide [82]. Simi- lar mechanisms may be important in Geobacter spe- cies [83], but the terminal reductase for U(VI) in this
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organism remains to be identified unequivocally. A ge- netic approach has been used to characterise the elec- tron transfer chain in Shewanella putrefaciens [84], and here the authors suggested that U(VI) was reduced via a nitrite reductase. By contrast, the reduction of TcO4
� to Tc(IV) by Escherichia coli, Desulfovibrio de- sulfuricans and Geobacter sulfurreducens is mediated by a hydrogenase enzyme. In the case of E. coli [85] and Desulfovibrio fructosovorans [86], detailed studies of the mechanism have been carried out.
Indirect transformations occur through biological production of redox active species. The reduced mem- bers of the Mn, Fe and SO4
2� TEAs are of most interest because the products of NO3
� (except NO2 �) or CO2 re-
duction are not good chemical reductants for kinetic rea- sons. However, Mn(II), Fe(II) and species such as S2O3
2�
or S2� are chemically reactive and can themselves func- tion as reductants, for example causing transformations such as reduction of UO2
2þ. However, the presence of a potential reductant does not necessarily mean that reduction will occur. For example, Moyes et al. [87] showed that uranium was initially adsorbed by mackina- wite (FeS) as a UO2
2þ surface complex to oxide binding sites on the surface. Only at higher UO2
2þ concentrations was uranium reduction observed. By contrast, NpO2
þ
was readily reduced by mackinawite at all concentra- tions [88]. Similar considerations apply to, for example, Fe(II) in magnetite (Fe3O4) or siderite (FeCO3).
2.1. Selectivity
Although the expected mobile forms of the actinides are the higher oxidation state actinyl ions (UO2
2þ, NpO2
þ, PuO2 þ) and these share many chemical similari-
ties, they can differ considerably in redox properties and it is not clear that an organism or process which will cause one to be reduced will necessarily reduce another even though the redox potentials might suggest the re- action should occur. For example, Renshaw et al. [89] showed that G. sulfurreducens could not reduce NpO2
þ
even though it easily reduced UO2 2þ. The first product
of bioreduction of uranium was identified as UO2 þ,
which is unstable with respect to disproportionation, so that the mechanism is as shown in Fig. 2.
This suggests that the enzyme system responsible for uranium reduction is capable of transferring one elec- tron to an actinyl ion. The instability of the resulting U(V) then generates U(IV), whose insolubility drives the reaction. Reduction of Np(V) therefore fails because the enzyme cannot transfer an electron to bound NpO2
þ. For this reason, it might be expected that PuO2
þ should also not be reduced enzymatically by G. sulfurreducens.
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The potential for bioreduction of Pu(IV) to the more mobile Pu(III) is less clear, particularly as complexation can significantly alter the redox properties. The impli- cations are therefore that a Geobacter-dominated com- munity would be effective at immobilising U and could potentially mobilise Pu from mixed U, Np, Pu contam- ination. Clearly, indirect reduction of Np in the natural environment would still be possible and different organ- isms could give different outcomes. For example, both the dissimilatory iron-reducing bacterium Shewanella pu- trefaciens and a mixed consortium of sulphate-reducing organisms have been shown to reduce Np(V) effectively [77,90]. There is thus a need to understand both reaction mechanisms and microbial community structure in applications of in situ bioremediation processes.
2.2. In situ bioremediation
As mentioned previously, uranium is the predomi- nant problem in radioactively contaminated land. As the volumes of uranium mine waste are so large and, in some cases, the material is so inaccessible, the poten- tial costs of remediation by conventional means are huge and the circumstances are particularly attractive for bioremediation. While the underlying principles of bioremediation have been clear for well over 10 years [91], it has taken some time to progress to practical demonstrations. Thus, we have moved from model systems (single organisms in pure culture) to proof- of-concept (laboratory studies of natural soils and sed- iments containing mixed microbial communities) and, more recently, to field-scale studies. Here, we review some of the recent literature relating to field trials and discuss some of the uncertainties and questions which remain to be answered.
Fig. 2. Mechanism of UO2 2þ
reduction by G. sulfurreducens (after Ref. [89]).
Please cite this article in press as: J.C. Renshaw et al., C. R. Chim. (2007
2.2.1. Application in the field The principle of biostimulation is straightforward e
in response to addition of electron donor (e.g. glucose, ethanol, acetate) to the subsurface, a range of bioreduc- tion processes will be triggered, including the reduction (direct or indirect) of radionuclides from high oxidation state, mobile forms to low oxidation state, immobile forms. These processes are being used at field sites such as Old Rifle, Colorado and the Field Research Center (FRC), Oak Ridge, Tennessee.
The Old Rifle site is a redundant uranium ore pro- cessing facility at which large piles of mill tailings are leaching uranium into the subsurface and uranium plumes in groundwater are migrating towards the Col- orado River [92]. Acetate was injected into the subsur- face from an array of wells, leading to a decrease in dissolved uranium concentrations down-flow within 9 days and, by 50 days, dissolved uranium concentrations had fallen from typical values of 0.8e1.5 mM to <0.18 mM at some locations. In the early stages of treatment, Geobacter species were dominant but, as the experiment continued, the system switched to sulphate reduction and this was associated with an in- crease in dissolved uranium concentrations. Thus, to sustain effective uranium removal from groundwater, it appears to be advantageous to poise the system in Fe(III)-reducing conditions. A subsequent study [93] showed that heterogeneity was a dominant control in in situ treatment, with local differences in hydrology leading to uneven distribution of electron donor and hence of Geobacter activity and uranium reduction.
At sites such as the FRC which have been used in the processing of nuclear materials, subsurface nitrate con- centrations are often very high and this can complicate matters in comparison with former uranium mining and ore processing sites [94]. For example, FRC groundwa- ter can contain 50e150 mM NO3
�. Wu et al. [95,96] found it necessary to flush excess mobile nitrate, alu- minium and calcium from the groundwater before com- mencing U(VI) reduction, while Luo et al. [97] removed mobile nitrate over a period of months, then maintained the system in conditions where in situ ni- trate removal occurred. Only after this preliminary treatment was U(VI) reduction achievable [96]. By con- trast, Istok et al. [98] identified variable responses. On some occasions, both uranium and technetium were removed from solution, although some reduced U(IV) reoxidised later and dissolved concentrations increased again. In other locations, technetium was readily removed from solution but dissolved uranium concen- trations were unaffected. Substantial variability in FRC sediment biogeochemistry was also observed in
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laboratory microcosms [99]. Likewise, Shelobolina et al. [100] found that biological reduction of nitrate, stimulated by acetate amendment, caused a rise in pH and loss of UO2
2þ from solution, but through hydrolysis and precipitation, rather than through reduction.
2.2.2. The role of surfaces and solid phases Solid phases are also important in determining the
outcome of in situ treatments. For example, Jeon et al. [101] showed that the nature of Fe(III) oxide surfaces, which could take up UO2
2þ from solution, was variable and that anthraquinone disulfonate (AQDS), an electron shuttle, speeded up reduction of both UO2
2þ and Fe(III). The rate of bacterial UO2
2þ reduction has also been shown to be intimately related to the nature (structure, surface area) of the hydrous Fe(III) oxides involved [102,103], while Ortiz-Bernad et al. [104] found that UO2
2þ adsorbed on mineral surfaces (presumed to be Fe(III) hydrous oxides and clays) was not susceptible to microbial reduction.
2.2.3. Persistence While natural UO2, the mineral pitchblende, is rel-
atively robust in near-surface conditions, as can be seen from studies of exposed uranium mineralization (Needle’s Eye, Pocos de Caldas), the products of bio- reduction are, at least initially, rather different. The first-formed material has a very small particle size [105], is often poorly crystalline or amorphous, and is a hydrated phase. After precipitation, hydrous oxide phases continue to evolve both chemically and struc- turally so that aging effects, as previously discussed for Pu(IV) colloid and studied in detail for Fe(III) phases [106], are important. Thus, in the situation where active manipulation of the subsurface biogeo- chemistry has ceased, it is important to understand the potential for further redox reactions which may or may not be associated with re-establishment of oxidising conditions and which could lead to redisso- lution of the precipitated contaminants.
Thus, Wan et al. [107] showed, using long-term (17 months) column experiments that, even though the sys- tem remained reducing as a whole, biogenic U(IV) could be reoxidised and solubilized. They proposed that, even in a reducing system, Fe(III) and Mn(IV) could persist and act used as TEAs in U(IV) oxidation. Nitrate can sim- ilarly be used to promote reoxidation of U(IV) [98,108e 110] and the redox transformations of nitrite are closely coupled with those of Fe and hence U [109]. By contrast, at an abandoned uranium mine (Midnite, Washington), enzymatically reduced uranium persisted in the sedi- ments in spite of repeated periods of drying [111].
Please cite this article in press as: J.C. Renshaw et al., C. R. Chim. (20
It has been demonstrated clearly that technetium can be effectively reduced in sediment systems by microbial activity [98,112,113]. Tc reduction can be both indirect, mediated by biogenic Fe(II) [114,115], and direct [115]. While, in most studies, Tc reduction is associated with loss from solution, Wildung et al. [113] found that dis- solved Tc concentrations decreased less than expected, and attributed this to the formation of a soluble complex of reduced Tc. The behaviour of technetium on reoxida- tion is not so clearly understood. Istok et al. [98] found that the reduced form of Tc was stable on the re-estab- lishment of oxic conditions. By contrast, Burke et al. [116] found that, with air as oxidant, ca. 50% of Tc was reoxidised to TcO4
� and released to solution whereas, with NO3
� as oxidant, even though substantial quantities of TcO4
� were again formed, <10% of the Tc inventory was released to solution.
3. Conclusions
The environmental behaviour of radionuclides is dominated by their chemical speciation (oxidation state, complex form). The actinide elements can exhibit very complex speciation chemistries, as illustrated by Pu, which can exist in multiple oxidation states simul- taneously and, as Pu(IV), undergoes complicated hy- drolysis reactions. Understanding the chemistry is of fundamental importance for predicting and controlling radionuclides in the environment; anything that impacts their chemical speciation will significantly affect their environmental behaviour. Microorganisms can alter both the complex form and oxidation states of a range of radionuclides. Microbially produced ligands can complex radionuclides and lead to either increased mo- bility of radionuclides in the environment, for example through leaching from insoluble phases, or reduced mo- bility through precipitation. The focus of many recent studies has been microbial redox transformations, with most investigations concentrating on U(VI). Mi- crobes have been found to mediate redox transforma- tions of U(VI), Np(V) and Tc(VII), either through direct enzymatic mechanisms or indirectly through the formation of other redox active chemical species (e.g. Mn(II) or Fe(II)). In the case of uranium, soluble, mobile U(VI) (as UO2
2þ) is reduced to insoluble, immo- bile U(IV) (as UO2) and in situ investigations of ura- nium-contaminated sites have sought to stimulate these transformations (through the addition of an elec- tron donor such as acetate), to act as a possible bioreme- diation strategy [92,93]. However, the geochemical environment at such sites can affect microbial redox transformations and the reduced products. Mineral
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phases can limit the bioavailability of U(VI) for micro- bial reduction [104], whilst the presence of other redox active species can inhibit U(VI) reduction by acting as competing electron acceptors, or can re-oxidise the bio- genic U(IV) [94,98,108e110]. A thorough knowledge of these microbial transformations and their role in the biogeochemistry of redox active radionuclides is needed to understand the environmental behaviour of these radionuclides and to develop bioremediation strategies to limit their migration.
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- Microbial interactions with actinides and long-lived fission products
- Introduction
- Background
- Chemical aspects
- Radioactively contaminated land
- Microbiological aspects
- Microorganisms in radioactive environments
- Biosorption
- Intraceullular uptake
- Bioleaching
- Biomineralization
- Redox transformations
- Selectivity
- In situ bioremediation
- Application in the field
- The role of surfaces and solid phases
- Persistence
- Conclusions
- References